Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  13
• Reference
  J:42381 Diez E, et al., Genetic and physical mapping of the mouse host resistance locus Lgn1. Mamm Genome. 1997 Sep;8(9):682-5
• ID
  MGI:1101110

Genes

Gene	Assay Type	Description
D13Mit128	PCR amplified length variant
D13Mit194	PCR amplified length variant
D13Mit147	PCR amplified length variant
D13Gor4	Southern analysis	D13Gor4 probe1
D13Mit36	PCR amplified length variant
D13Mit146	PCR amplified length variant
D13Die6	PCR amplified length variant
Naip1	PCR amplified length variant
Naip5	resistance/susceptibility
D13Mit37	PCR amplified length variant
D13Die7	PCR amplified length variant
D13Die3	PCR amplified length variant
D13Mit70	PCR amplified length variant

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>
• Strain
  (C57BL/6J x A/J)F1
• Male Parent
  <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>/<a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a> <a>
• Strain
  A/J
• Allele 1
  b from C57BL/6J
• Allele 2
  a from A/J

CROSS Data

MC #mice	D13Mit128	D13Mit194	D13Mit147	D13Gor4	D13Mit36	D13Mit146	D13Die6	Naip1	Naip5	D13Mit37	D13Die7	D13Die3	D13Mit70
606	b	b	b	b	b	b	b	b	b	b	b	b	b
600	a	a	a	a	a	a	a	a	a	a	a	a	a
12	b	a	a	a	a	a	a	a	a	a	a	a	a
8	a	b	b	b	b	b	b	b	b	b	b	b	b
1	a	a	b	b	b	b	b	b	b	b	b	b	b
7	b	b	b	a	a	a	a	a	a	a	a	a	a
5	a	a	a	b	b	b	b	b	b	b	b	b	b
1	b	b	b	b	a	a	a	a	a	a	a	a	a
6	b	b	b	b	b	a	a	a	a	a	a	a	a
5	a	a	a	a	a	b	b	b	b	b	b	b	b
2	a	a	a	a	a	a	a	b	b	b	b	b	b
2	a	a	a	a	a	a	a	a	a	a	b	b	b
6	b	b	b	b	b	b	b	b	b	b	b	b	a
9	a	a	a	a	a	a	a	a	a	a	a	a	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D13Mit128	D13Mit194	20	1270	1.575	0.349
D13Mit194	D13Mit147	1	1270	0.079	0.079
D13Mit147	D13Gor4	12	1270	0.945	0.271
D13Gor4	D13Mit36	1	1270	0.079	0.079
D13Mit36	D13Mit146	11	1270	0.866	0.260
D13Mit146	D13Die6	0	1270	0.000	0.000
D13Die6	Naip1	2	1270	0.157	0.111
Naip1	Naip5	0	1270	0.000	0.000
Naip5	D13Mit37	0	1270	0.000	0.000
D13Mit37	D13Die7	2	1270	0.157	0.111
D13Die7	D13Die3	0	1270	0.000	0.000
D13Die3	D13Mit70	15	1270	1.181	0.303