Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  6
• Reference
  J:30437 Nishimura M, et al., The SMXA: a new set of recombinant inbred strain of mice consisting of 26 substrains and their genetic profile. Mamm Genome. 1995 Dec;6(12):850-7
• ID
  MGI:1195884

Genes

Gene	Assay Type
D6Mit17	reported elsewhere
Cd8a	reported elsewhere
D6Mit16	reported elsewhere
D6Mit3	reported elsewhere
D6Mit4	reported elsewhere
D6Mit8	reported elsewhere
Prh1	reported elsewhere
D6Mit25	reported elsewhere

RI

• Origin
  SM/J x A/J
• Designation
  SMXA
• Abbreviation 1
  A
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	3	4	5	6	7	8	9	10	11	12	14	15	16	17	18	19	20	21	21d	22	23	24	25	26	27	29	30
D6Mit17	A	S	S	A	A	A	A	A	S	S	A	S	S	A	S	S	A	.	A	.	A	S	S	S	A	A	S	A
Cd8a	A	S	S	A	S	A	A	A	S	S	A	S	S	A	S	S	A	.	A	.	S	S	S	A	A	A	S	A
D6Mit16	A	S	S	A	S	A	A	A	S	S	A	S	S	A	S	S	A	.	A	.	A	S	S	A	A	A	S	A
D6Mit3	A	S	S	A	S	A	A	A	A	S	A	S	S	A	S	A	A	.	A	.	A	S	S	A	A	A	S	A
D6Mit4	A	S	S	A	S	A	A	A	A	S	A	S	S	A	S	A	A	.	A	.	S	S	S	A	A	A	A	A
D6Mit8	A	S	S	A	S	A	A	A	A	S	A	S	S	A	S	A	A	.	A	.	S	S	A	A	A	A	A	A
Prh1	A	S	S	S	A	A	A	A	A	S	S	S	S	S	S	A	S	.	A	.	S	S	A	S	A	A	A	A
D6Mit25	A	S	S	S	A	A	A	A	S	S	S	S	A	S	S	A	S	.	A	.	S	S	A	S	A	S	A	A

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D6Mit17	Cd8a	3	26	3.488	2.291
Cd8a	D6Mit16	1	26	1.020	1.062
D6Mit16	D6Mit3	2	26	2.174	1.670
D6Mit3	D6Mit4	2	26	2.174	1.670
D6Mit4	D6Mit8	1	26	1.020	1.062
D6Mit8	Prh1	6	26	8.824	4.832
Prh1	D6Mit25	3	26	3.488	2.291