Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  15
• Reference
  J:30437 Nishimura M, et al., The SMXA: a new set of recombinant inbred strain of mice consisting of 26 substrains and their genetic profile. Mamm Genome. 1995 Dec;6(12):850-7
• ID
  MGI:1195932

Genes

Gene	Assay Type
D15Mit13	reported elsewhere
D15Mit12	reported elsewhere
D15Mit11	reported elsewhere
D15Mit17	reported elsewhere
D15Mit28	reported elsewhere
Ly6	reported elsewhere
D15Mit33	reported elsewhere
Spe2	electrophoretic
D15Mit16	reported elsewhere
Hoxc	reported elsewhere

RI

• Origin
  SM/J x A/J
• Designation
  SMXA
• Abbreviation 1
  A
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	3	4	5	6	7	8	9	10	11	12	14	15	16	17	18	19	20	21	21d	22	23	24	25	26	27	29	30
D15Mit13	S	A	A	A	A	S	S	A	S	A	S	A	A	S	A	S	A	.	A	.	A	S	A	S	A	A	A	S
D15Mit12	S	A	A	A	A	S	S	A	S	A	S	A	A	S	A	S	A	.	A	.	A	S	A	S	A	A	A	S
D15Mit11	A	A	S	A	A	S	S	A	S	A	S	A	A	S	A	S	A	.	S	.	A	S	A	S	S	A	A	S
D15Mit17	A	S	S	S	S	S	A	A	S	S	S	A	A	S	S	A	S	.	S	.	S	S	S	A	A	S	S	S
D15Mit28	A	S	S	A	S	S	A	A	S	A	A	A	A	A	S	S	A	.	S	.	S	S	S	A	A	S	S	A
Ly6	A	S	S	A	A	S	A	A	S	A	A	A	A	A	S	S	A	.	S	.	S	S	S	S	A	S	S	A
D15Mit33	S	A	A	A	S	S	A	A	S	A	A	A	S	A	S	A	A	.	A	.	S	S	S	S	A	S	S	A
Spe2	S	S	A	S	S	S	A	A	S	S	A	A	A	S	S	S	A	.	A	.	S	S	S	S	S	S	A	A
D15Mit16	S	S	A	S	S	S	A	A	S	S	A	S	A	S	A	S	A	.	A	.	S	S	S	S	S	S	A	A
Hoxc	S	S	A	S	S	S	A	A	A	S	A	A	A	S	A	S	A	.	A	.	S	S	S	S	S	A	A	A

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D15Mit13	D15Mit12	0	26	0.000	0.000
D15Mit12	D15Mit11	4	26	5.000	2.990
D15Mit11	D15Mit17	14	26	70.000	66.091
D15Mit17	D15Mit28	7	26	11.290	6.119
D15Mit28	Ly6	2	26	2.174	1.670
Ly6	D15Mit33	7	26	11.290	6.119
D15Mit33	Spe2	8	26	14.286	7.805
Spe2	D15Mit16	2	26	2.174	1.670
D15Mit16	Hoxc	3	26	3.488	2.291