Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:44483 Brady KP, et al., Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Genome Res. 1997 Nov;7(11):1085-93
• ID
  MGI:1202934

Genes

Gene	Assay Type	Description
Zfp28	PCR amplified length variant	DB79-80
D5Mit48	PCR amplified length variant
Cd36	PCR amplified length variant	A150
Gnai1	PCR amplified length variant	A260
D5Mit1	PCR amplified length variant
Fgl2	PCR amplified length variant	A235
D5Mit149	PCR amplified length variant
D5Mit351	PCR amplified length variant
Crmp1	PCR amplified length variant	A599
D5Mit5	PCR amplified length variant
D5Mit15	PCR amplified length variant
Rufy3	PCR amplified length variant	A487
Btc	PCR amplified length variant	A149
D5Mit9	PCR amplified length variant
Sparcl1	PCR amplified length variant	A396, A658
D5Bwg0676e	PCR amplified length variant	A397
Cox6a1	PCR amplified length variant	A155
Sgsm1	PCR amplified length variant	A744
Pebp1	PCR amplified length variant	A538
Ndufb11	PCR amplified length variant	A355, A360
Ccdc92	PCR amplified length variant	A440
D5Mit46	PCR amplified length variant
Fscn1	PCR amplified length variant	A496
Prkar1b	PCR amplified length variant	A208
Ywhag	PCR amplified length variant

Notes

• Reference
  Authors use Reca, Rch1, Egr5, Rir, Cirp-rs, Cirp-rs2 and Cirp-rs3 for locus symbols Rad51a, Kpna2, Tgfb1i4, Apbb1, Cirbp-rs1, Cirbp-rs2 and Cirbp-rs3 respectively.
• Experiment
  Detailed mapping data for markers segregating in this cross is associated with the JAX (BSS) mapping panel, accessible by clicking on the JAX link highlighted below.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6JEi x SPRET/Ei)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  SPRET/EiJ
• Mapping Panel
  JAX (BSS)
• Allele 1
  b from C57BL/6JEiJ
• Allele 2
  s from SPRET/EiJ