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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    6
  • Reference
    J:47939 McKee-Johnson JW, et al., Physical and genetic maps of the deafwaddler region on distal mouse Chr 6. Genomics. 1998 May 1;49(3):371-7
  • ID
    MGI:1270124
Genes
GeneAlleleAssay TypeDescription
D6Mit64 PCR amplified length variant
Cntn3 PCR amplified length variant Pang-pA, Pang-pB
Itpr1 PCR amplified length variant Itpr1-pA, Itpr1-pB
D6Mit108 PCR amplified length variant
D6Mit54 PCR amplified length variant
D6Mit23 PCR amplified length variant
D6Mit107 PCR amplified length variant
D6Mit328 PCR amplified length variant
D6Mit11 PCR amplified length variant
Atp2b2 visible phenotype
D6Mit55 PCR amplified length variant
Slc6a11 Southern analysis GAT-B
D6Mit63 PCR amplified length variant
Syn2 PCR amplified length variant Syn2-pA, Syn2-pB
D6Mit44 PCR amplified length variant
Notes
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, sexes unspecified or combined
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    (CAST/Ei x C3HeB/FeJ-Atp2b2)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C3HeB/FeJ-Atp2b2
  • Allele 1
    c from CAST/EiJ
  • Allele 2
    b from C3HeB/FeJ-Atp2b2
CROSS Data
MC #mice D6Mit64 Cntn3 Itpr1 D6Mit108 D6Mit54 D6Mit23 D6Mit107 D6Mit328 D6Mit11 Atp2b2 D6Mit55 Slc6a11 D6Mit63 Syn2 D6Mit44
51 b . . . . . . . b b . . . . b
45 c . . . . . . . c c . . . . c
612 b . . . . . . . . b . . . . b
206 c . . . . . . . . c . . . . c
1 c b b b b b b b b b b b b b b
4 b b c c c c c c c c c c c c c
8 c c b b b b b b b b b b b b b
2 b b b c c c c c c c c c c c c
4 c c c b b b b b b b b b b b b
5 c c c c b b b b b b b b b b b
2 c c c c c b b b b b b b b b b
3 b b b b b b b b c c c c c c c
4 c c c c c c c c b b b b b b b
2 c c c c c c c c c b b b b b b
8 b b b b b b b b b b c c c c c
1 c c c c c c c c c c b b b b b
1 b b b b b b b b b b b b c c c
2 b b b b b b b b b b b b b c c
1 c c c c c c c c c c c c c b b
3 b b b b b b b b b b b b b b c
3 c c c c c c c c c c c c c c b
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D6Mit11 Atp2b2 2 150 1.333 0.937

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory