Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:41383 King DP, et al., The mouse Clock mutation behaves as an antimorph and maps within the W19H deletion, distal of Kit. Genetics. 1997 Jul;146(3):1049-60
• ID
  MGI:1327239

Genes

Gene	Assay Type	Description
D5Mit135	reported elsewhere
D5Mit235	reported elsewhere
D5Mit201	reported elsewhere
Pdgfra	SSLP	Pdgfra forward/Pdgfra reverse
Kit	Southern analysis	Kit cDNA10
D5Mit307	reported elsewhere
Clock	SSLP	Clock-pA, Clock-pB
D5Mit357	reported elsewhere
D5Mit309	reported elsewhere
D5Mit271	reported elsewhere
D5Mit114	reported elsewhere
D5Mit236	reported elsewhere
Csn2	reported elsewhere
Afp	reported elsewhere

Notes

• Experiment
  C57BL/6J - Clock/+ N4 animals were four backcross generations removed from the ENU-treated animal. No recombinations were observed between the D5Mit235 and D5Mit201 loci in this cross.

CROSS

• Type
  Backcross, male
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c>
• Strain
  (BALB/cJ +/+ x C57BL/6J-Clock N4)F1-Clock
• Allele 1
  b from C57BL/6J
• Allele 2
  c from BALB/cJ

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D5Mit135	D5Mit235	1	213
D5Mit135	D5Mit201	1	213
D5Mit235	Pdgfra	0	214
D5Mit201	Pdgfra	0	214
Pdgfra	Kit	0	214
Kit	D5Mit307	2	212
D5Mit307	Clock	0	214
Clock	D5Mit357	3	211
D5Mit357	D5Mit309	1	213
D5Mit309	D5Mit271	0	214
D5Mit271	D5Mit114	1	213
D5Mit114	D5Mit236	0	214
D5Mit236	Csn2	3	211
Csn2	Afp	1	213

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D5Mit135	D5Mit235	1	214	0.467	0.466
D5Mit135	D5Mit201	1	214	0.467	0.466
D5Mit235	Pdgfra	0	214	0.000	0.000
D5Mit201	Pdgfra	0	214	0.000	0.000
Pdgfra	Kit	0	214	0.000	0.000
Kit	D5Mit307	2	214	0.935	0.658
D5Mit307	Clock	0	214	0.000	0.000
Clock	D5Mit357	3	214	1.402	0.804
D5Mit357	D5Mit309	1	214	0.467	0.466
D5Mit309	D5Mit271	0	214	0.000	0.000
D5Mit271	D5Mit114	1	214	0.467	0.466
D5Mit114	D5Mit236	0	214	0.000	0.000
D5Mit236	Csn2	3	214	1.402	0.804
Csn2	Afp	1	214	0.467	0.466