Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  11
• Reference
  J:50546 Resch K, et al., Homology between human chromosome 2p13.3 and the wobbler critical region on mouse chromosome 11: comparative high-resolution mapping of STS and EST loci on YAC/BAC contigs. Mamm Genome. 1998 Nov;9(11):893-8
• ID
  MGI:1337330

Genes

Gene	Assay Type	Description
D11Mit107	overlapping clones
D11Mit170	overlapping clones
Meis1	overlapping clones
D11Mit295	overlapping clones
D11Hjk21	overlapping clones
Glns-ps1	overlapping clones
D11Mit79	overlapping clones
D11Hjk22	overlapping clones
D11Hjk1	overlapping clones
D11Hjk2	overlapping clones
D11Hjk8	overlapping clones
Rab1a	overlapping clones
D11Hjk3	overlapping clones
D11Hjk4	overlapping clones
D11Hjk5	overlapping clones
D11Hjk6	overlapping clones
A007110	overlapping clones
stSG4420	overlapping clones
D11Hjk9	overlapping clones
D11Hjk16	overlapping clones
D11Hjk17	overlapping clones
D11Mit343	overlapping clones
D11Hjk10	overlapping clones
16.MMHAP64FLF1.seq	overlapping clones
Otx1	overlapping clones
Mdh1	overlapping clones
D11Hjk18	overlapping clones
D11Hjk19	overlapping clones
D11Mit294	overlapping clones
D11Hjk23	overlapping clones
D11Hjk11	overlapping clones
D11Mit19	overlapping clones
MHAA30G12.seq	overlapping clones
D11Hjk24	overlapping clones
D11Hjk12	overlapping clones
D11Mit81	overlapping clones
D11Hjk25	overlapping clones
D11Hjk20	overlapping clones
D11Hjk13	overlapping clones
D11Mit151	overlapping clones
03.MMHAP34FRA.seq	overlapping clones
D11Hjk14	overlapping clones
D11Mit152	overlapping clones
D11Hjk15	overlapping clones
Rel	PCR amplified length variant	Rel-pA, Rel-pB

Notes

• Reference
  Personal correspondence From Dr. Rosemary Elliot indicates that WI-11513 does not map with chromosome 11. The marker has been been removed from this cross, but remains in the text of the physical mapping experiment.
  
  Details:
  WI-11513 is listed on Chr 11, but the only seq hits are on Chrs 17 and
  15, needs to be checked. Either the assignment is wrong or the
  assigned seq is not the correct one.
  
  
• Experiment
  The authors constructed a YAC/BAC contig of the wobbler gene critical region. The critical region was narrowed to a 1.2 =/- 0.9 cM region between D11Mit79 and D11Mit19. The order of the markers on mouse Chromosome 11 is: D11Mit107 - D11Mit170 - Meis1 - D11Mit295 - D11Hjk21 - Glns-ps1 - D11Mit79 - D11Hjk22 - D11Hjk1 - D11Hjk2 - D11Hjk8 - Rab1 - D11Hjk3 - D11Hjk4 - D11Hjk5 - D11Hjk6 - WI-11513 - A007110 - stSG4420 - D11Hjk9 - D11Hjk16 - D11Hjk17 - D11Mit343 - D11Hjk10 - 16.MMHAP64FLF1.seq - Otx1 - Mdh1 - D17921 - D11Hjk18 - D11Hjk19 - D11Mit294 - D11Hjk23 - D11Hjk11 - D11Mit19 - MHAA30G12.seq - D11Hjk24 - D11Hjk12 - D11Mit81 - D11Hjk25 - D11Hjk20 - D11Hjk13 - D11Mit151 - 03.MMHAP34FRA.seq - D11Hjk14 - D11Mit152 - D11Hjk15 - Rel.