Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  4
• Reference
  J:50273 Poltorak A, et al., Genetic and physical mapping of the Lps locus: identification of the toll-4 receptor as a candidate gene in the critical region. Blood Cells Mol Dis. 1998 Sep;24(3):340-55
• ID
  MGI:1340505

Genes

Gene	Allele	Assay Type
D4Mit164		PCR amplified length variant
C.seq		PCR amplified length variant
Cprime		PCR amplified length variant
B.seq		PCR amplified length variant
Tlr4	Tlr4^Lps-d	visible phenotype
D4Mit178		PCR amplified length variant
A.seq		PCR amplified length variant
E.seq		PCR amplified length variant
D.seq		PCR amplified length variant
CA7.3		PCR amplified length variant
D4Mit27		PCR amplified length variant

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BL/6 x C3H/HeJ)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ
• Allele 1
  b from C57BL/6
• Allele 2
  c from C3H/HeJ

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D4Mit164	C.seq	18	1582
D4Mit164	Cprime	18	1582
C.seq	B.seq	13	1587
Cprime	B.seq	13	1587
B.seq	D4Mit178	4	1596
Tlr4	D4Mit178	0	1600
D4Mit178	A.seq	0	1600
Tlr4	A.seq	0	1600
D4Mit178	E.seq	0	1600
Tlr4	E.seq	0	1600
D4Mit178	D.seq	0	1600
Tlr4	D.seq	0	1600
A.seq	CA7.3	0	1600
E.seq	CA7.3	0	1600
D.seq	CA7.3	0	1600
Tlr4	CA7.3	0	1600
CA7.3	D4Mit27	153	1447

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D4Mit164	C.seq	18	1600	1.125	0.264
D4Mit164	Cprime	18	1600	1.125	0.264
C.seq	B.seq	13	1600	0.812	0.224
Cprime	B.seq	13	1600	0.812	0.224
B.seq	D4Mit178	4	1600	0.250	0.125
Tlr4	D4Mit178	0	1600	0.000	0.000
D4Mit178	A.seq	0	1600	0.000	0.000
Tlr4	A.seq	0	1600	0.000	0.000
D4Mit178	E.seq	0	1600	0.000	0.000
Tlr4	E.seq	0	1600	0.000	0.000
D4Mit178	D.seq	0	1600	0.000	0.000
Tlr4	D.seq	0	1600	0.000	0.000
A.seq	CA7.3	0	1600	0.000	0.000
E.seq	CA7.3	0	1600	0.000	0.000
D.seq	CA7.3	0	1600	0.000	0.000
Tlr4	CA7.3	0	1600	0.000	0.000
CA7.3	D4Mit27	153	1600	9.562	0.735