Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  1
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343298

Genes

Gene	Assay Type
D1Mit294	PCR amplified length variant
D1Mit67	PCR amplified length variant
D1Mit231	PCR amplified length variant
D1Mit211	PCR amplified length variant
D1Mit322	PCR amplified length variant
D1Mit213	PCR amplified length variant
Idh1	PCR amplified length variant
D1Mit76	PCR amplified length variant
D1Mit282	PCR amplified length variant
D1Mit19	PCR amplified length variant
D1Mit180	PCR amplified length variant
D1Mit181	PCR amplified length variant
D1Mit415	PCR amplified length variant
D1Mit135	PCR amplified length variant
D1Mit309	PCR amplified length variant
D1Mit218	PCR amplified length variant
D1Mit30	PCR amplified length variant
Pepc	PCR amplified length variant
D1Mit200	PCR amplified length variant
D1Mit425	PCR amplified length variant
D1Mit106	PCR amplified length variant
D1Mit145	PCR amplified length variant
D1Mit113	PCR amplified length variant
D1Mit150	PCR amplified length variant
D1Mit426	PCR amplified length variant
D1Mit361	PCR amplified length variant
D1Mit155	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D1Mit294	B	B	D	D	D	B	D	D	B	B	D	D	B	D	D	D	D	B	B	D	B	D	D	B	B	B	D	B	B	B	B	B	D	B	D	B
D1Mit67	B	B	B	D	D	B	D	D	B	B	D	D	B	D	D	D	D	B	B	D	B	B	D	B	B	B	D	B	B	B	B	B	D	B	D	B
D1Mit231	D	B	B	D	D	B	D	D	B	B	D	D	D	D	D	D	D	B	B	D	B	B	D	B	B	B	D	B	B	B	B	B	D	B	D	B
D1Mit211	D	B	B	D	D	B	D	D	B	B	B	D	D	D	B	D	B	B	B	D	D	B	D	D	B	B	D	B	B	B	B	B	D	B	D	D
D1Mit322	D	B	B	D	D	B	B	D	B	B	D	D	D	D	D	D	B	B	B	D	B	B	D	D	B	B	D	B	B	B	D	B	D	B	D	D
D1Mit213	D	B	B	D	D	B	B	B	B	B	B	D	D	D	D	D	B	B	B	D	D	D	D	D	B	B	D	B	B	B	D	B	D	B	B	D
Idh1	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	B	D	D	B	D	B	B	D
D1Mit76	B	B	B	D	D	B	B	B	B	B	D	D	B	D	B	B	B	B	B	D	D	D	D	D	B	D	D	D	B	D	D	B	D	B	B	D
D1Mit282	D	B	B	D	D	B	B	B	D	B	D	B	B	B	B	B	D	D	B	D	D	D	D	D	B	D	D	D	B	D	D	B	D	B	D	D
D1Mit19	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	D	D	D	B	D	D	B	D	B	D	D
D1Mit180	D	B	B	D	D	B	B	B	D	B	D	B	B	B	B	B	D	D	B	D	D	D	B	D	B	D	D	D	B	D	D	B	D	B	D	D
D1Mit181	D	B	B	D	D	B	B	B	D	B	D	B	B	B	B	B	B	D	B	D	D	D	B	D	B	D	D	D	D	D	D	B	D	B	D	D
D1Mit415	B	B	B	D	D	B	B	B	D	B	D	B	B	B	D	B	D	D	D	D	B	D	B	D	B	D	D	D	D	B	D	B	D	D	.	D
D1Mit135	B	B	D	D	B	B	D	B	.	B	D	B	D	B	B	B	D	D	D	B	B	D	B	D	B	D	B	D	D	B	D	B	D	B	B	B
D1Mit309	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	B	D	D	D	B	D	D	D	D	B	D	B	D	B	B	B
D1Mit218	B	B	D	D	B	B	D	B	D	B	D	B	B	B	D	B	B	D	D	B	D	D	D	D	B	D	D	D	D	B	D	B	D	B	B	B
D1Mit30	B	B	D	D	B	B	D	B	D	B	D	B	B	B	D	B	B	D	D	B	D	D	D	D	B	D	D	D	D	B	D	B	D	B	.	B
Pepc	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	B	D	B	D	B	.	B
D1Mit200	B	B	D	B	B	D	D	B	D	B	B	B	B	B	D	B	D	D	D	D	D	D	D	D	B	D	D	D	D	B	D	B	D	B	D	B
D1Mit425	B	B	D	B	B	D	D	B	D	B	B	B	B	B	B	B	D	D	D	D	D	D	D	D	B	B	D	D	B	B	D	B	D	B	D	B
D1Mit106	B	B	D	B	B	D	D	B	D	B	B	B	B	B	B	B	D	D	D	D	D	D	D	D	B	D	D	D	B	B	D	B	D	D	D	B
D1Mit145	B	B	D	B	B	D	D	B	D	B	D	B	B	B	B	B	D	D	D	D	D	D	D	D	B	D	D	D	B	B	D	B	D	B	D	B
D1Mit113	B	D	D	B	D	D	D	B	B	B	B	B	B	B	B	B	D	B	D	D	D	D	B	D	B	D	B	D	B	B	D	B	D	B	B	B
D1Mit150	B	D	D	B	D	D	D	B	B	B	B	B	B	B	B	B	D	B	D	D	D	D	D	D	B	D	B	D	B	B	D	B	D	B	B	B
D1Mit426	B	B	D	B	D	D	D	B	B	B	B	B	B	B	B	B	D	B	D	D	D	D	D	D	B	D	B	D	B	B	D	D	D	B	B	B
D1Mit361	B	B	D	B	D	D	B	B	D	B	B	B	B	B	B	D	D	D	D	B	D	B	D	B	B	D	B	B	B	B	D	D	D	B	D	B
D1Mit155	B	B	D	D	D	D	B	B	B	D	D	B	B	B	D	D	D	D	D	B	D	B	D	B	B	D	B	B	B	B	D	D	D	B	D	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit294	D1Mit67	2	36	1.515	1.136
D1Mit67	D1Mit231	2	36	1.515	1.136
D1Mit231	D1Mit211	6	36	5.556	2.761
D1Mit211	D1Mit322	5	36	4.386	2.299
D1Mit322	D1Mit213	5	36	4.386	2.299
D1Mit213	Idh1	2	10	7.143	6.454
Idh1	D1Mit76	0	10	0.000	0.000
D1Mit76	D1Mit282	7	36	6.863	3.287
D1Mit282	D1Mit19	0	14	0.000	0.000
D1Mit19	D1Mit180	0	14	0.000	0.000
D1Mit180	D1Mit181	2	36	1.515	1.136
D1Mit181	D1Mit415	7	35	7.143	3.450
D1Mit415	D1Mit135	9	34	10.976	5.203
D1Mit135	D1Mit309	5	35	4.545	2.395
D1Mit309	D1Mit218	3	36	2.381	1.504
D1Mit218	D1Mit30	0	35	0.000	0.000
D1Mit30	Pepc	0	9	0.000	0.000
Pepc	D1Mit200	0	9	0.000	0.000
D1Mit200	D1Mit425	3	36	2.381	1.504
D1Mit425	D1Mit106	2	36	1.515	1.136
D1Mit106	D1Mit145	2	36	1.515	1.136
D1Mit145	D1Mit113	8	36	8.333	3.898
D1Mit113	D1Mit150	1	36	0.725	0.746
D1Mit150	D1Mit426	2	36	1.515	1.136
D1Mit426	D1Mit361	9	36	10.000	4.619
D1Mit361	D1Mit155	6	36	5.556	2.761