Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  2
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343299

Genes

Gene	Assay Type
D2Mit80	PCR amplified length variant
D2Mit6	PCR amplified length variant
D2Mit293	PCR amplified length variant
D2Mit82	PCR amplified length variant
D2Mit235	PCR amplified length variant
D2Mit238	PCR amplified length variant
D2Mit241	PCR amplified length variant
D2Mit56	PCR amplified length variant
D2Mit37	PCR amplified length variant
D2Mit94	PCR amplified length variant
D2Mit14a	PCR amplified length variant
D2Mit12	PCR amplified length variant
D2Mit58	PCR amplified length variant
D2Mit62	PCR amplified length variant
D2Mit304	PCR amplified length variant
D2Mit423	PCR amplified length variant
D2Mit412	PCR amplified length variant
D2Mit200	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D2Mit80	B	B	D	B	D	D	B	D	D	D	B	B	D	B	B	D	D	B	D	D	B	B	B	D	D	D	D	B	D	B	D	B	B	D	B	D
D2Mit6	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	.	.	B	.	D	D	D	D	B	D	B	D	B	B	D	B	D
D2Mit293	D	B	D	B	D	D	B	D	D	D	B	B	B	B	B	D	D	B	D	D	B	B	B	D	D	D	D	B	B	B	D	B	B	D	B	D
D2Mit82	D	B	D	B	D	D	B	D	D	D	B	D	B	B	B	D	D	B	D	D	B	B	B	D	D	D	B	B	B	B	D	B	B	D	B	D
D2Mit235	B	B	D	B	B	B	B	B	D	D	B	D	B	D	B	D	D	D	D	D	B	B	B	D	D	D	B	B	B	D	D	B	B	D	B	D
D2Mit238	B	B	D	B	B	D	B	B	D	D	B	D	B	D	B	D	D	D	D	D	B	B	B	D	D	D	B	D	B	D	D	B	B	D	D	D
D2Mit241	D	B	D	B	B	D	B	B	D	D	B	B	B	D	D	D	B	D	D	D	B	B	B	D	D	D	B	B	B	D	D	B	B	D	D	D
D2Mit56	D	D	D	B	B	B	D	B	D	D	B	D	B	D	D	D	B	D	D	B	B	B	B	D	D	B	B	B	B	D	B	D	B	D	D	D
D2Mit37	D	D	D	B	B	B	D	B	D	D	B	D	D	D	D	D	B	B	D	B	B	B	B	D	D	.	B	B	B	D	D	D	B	D	D	D
D2Mit94	D	D	D	B	B	D	D	D	D	D	B	D	D	D	D	D	B	D	D	B	B	B	D	D	B	D	B	B	B	D	D	D	D	D	D	D
D2Mit14a	B	B	D	B	B	D	D	D	D	D	B	D	D	D	D	D	B	D	D	B	B	B	D	D	B	D	B	B	B	D	D	D	D	D	D	D
D2Mit12	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	D	B	B	B	D	D	D	B	D	D	D
D2Mit58	B	D	B	B	D	B	D	B	B	B	B	D	B	D	D	D	B	D	D	D	D	D	D	D	B	D	B	B	B	D	D	D	B	D	B	D
D2Mit62	B	B	B	B	D	B	D	D	B	B	B	D	D	D	D	D	B	D	D	B	D	D	D	D	B	D	B	B	B	D	D	D	B	D	B	D
D2Mit304	B	B	B	B	D	D	B	D	B	B	D	D	D	D	D	D	B	D	D	B	D	D	D	D	D	B	B	B	B	D	D	D	B	D	B	D
D2Mit423	D	D	B	D	D	B	D	D	B	B	B	D	D	D	D	D	B	D	D	D	D	B	D	D	D	D	B	B	B	D	D	D	B	D	B	D
D2Mit412	D	D	B	D	B	D	B	D	D	B	B	B	D	B	D	D	B	D	B	D	D	B	B	D	D	D	B	B	B	D	D	D	B	D	D	D
D2Mit200	D	D	D	B	B	D	D	D	D	B	B	B	D	B	D	D	B	D	B	B	D	D	B	B	D	D	B	B	B	B	B	D	B	D	D	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D2Mit80	D2Mit6	1	16	1.724	1.842
D2Mit6	D2Mit293	1	16	1.724	1.842
D2Mit293	D2Mit82	2	36	1.515	1.136
D2Mit82	D2Mit235	7	36	6.863	3.287
D2Mit235	D2Mit238	3	36	2.381	1.504
D2Mit238	D2Mit241	5	36	4.386	2.299
D2Mit241	D2Mit56	8	36	8.333	3.898
D2Mit56	D2Mit37	3	35	2.459	1.558
D2Mit37	D2Mit94	6	35	5.769	2.886
D2Mit94	D2Mit14a	2	36	1.515	1.136
D2Mit14a	D2Mit12	1	14	2.000	2.159
D2Mit12	D2Mit58	1	14	2.000	2.159
D2Mit58	D2Mit62	4	36	3.333	1.886
D2Mit62	D2Mit304	5	36	4.386	2.299
D2Mit304	D2Mit423	9	36	10.000	4.619
D2Mit423	D2Mit412	9	36	10.000	4.619
D2Mit412	D2Mit200	9	36	10.000	4.619