Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  5
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343302

Genes

Gene	Assay Type
D5Mit346	PCR amplified length variant
D5Mit348	PCR amplified length variant
D5Mit180	PCR amplified length variant
D5Mit352	PCR amplified length variant
D5Mit79	PCR amplified length variant
D5Mit233	PCR amplified length variant
D5Mit255	PCR amplified length variant
Pgm2	PCR amplified length variant
D5Mit356	PCR amplified length variant
D5Mit7	PCR amplified length variant
D5Mit157	PCR amplified length variant
D5Mit24	PCR amplified length variant
D5Mit367	PCR amplified length variant
D5Mit371	PCR amplified length variant
D5Mit372	PCR amplified length variant
D5Mit168	PCR amplified length variant
D5Mit409	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D5Mit346	D	D	D	D	B	D	D	D	B	B	B	D	B	D	D	B	D	B	B	B	D	B	D	B	D	D	B	B	B	D	D	D	D	D	D	D
D5Mit348	D	D	D	B	B	B	D	D	B	B	B	D	B	D	D	B	D	B	B	B	D	D	B	B	D	D	B	.	B	D	D	D	B	D	D	D
D5Mit180	D	D	D	B	B	B	D	D	B	B	B	D	B	D	D	B	D	B	B	B	D	D	B	B	D	D	B	.	B	D	D	D	B	D	D	D
D5Mit352	B	D	D	B	B	B	D	B	B	B	B	D	B	D	D	B	D	B	D	B	B	D	B	D	D	D	B	D	B	D	D	B	B	B	B	D
D5Mit79	B	D	D	B	B	B	D	B	B	B	B	D	B	D	D	D	D	B	D	B	D	D	B	D	D	D	B	D	B	D	D	B	B	B	B	B
D5Mit233	B	D	D	B	B	B	B	B	B	B	B	D	B	D	D	D	D	B	D	B	B	D	B	D	D	D	B	D	B	D	D	B	B	B	B	B
D5Mit255	B	D	D	B	B	B	B	B	B	B	B	D	B	D	D	D	D	D	D	B	B	B	B	D	D	D	B	D	B	D	D	B	D	B	B	B
Pgm2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	D	B	D	D	B	D	B	B	D
D5Mit356	B	D	D	B	B	D	B	D	B	D	B	D	B	D	D	D	D	D	D	B	B	D	D	D	D	D	B	D	B	B	D	B	D	B	B	D
D5Mit7	D	D	D	B	B	B	B	D	B	D	B	D	B	B	B	D	D	B	D	B	B	B	D	D	D	D	B	B	B	D	D	D	D	B	B	D
D5Mit157	D	D	D	B	B	B	B	D	B	D	B	D	D	B	B	D	D	B	D	B	B	B	D	D	B	D	B	D	B	D	D	D	D	B	B	D
D5Mit24	B	D	D	D	D	B	D	D	B	B	B	D	D	B	B	D	D	B	D	B	B	B	D	D	B	D	D	D	B	D	D	D	D	B	B	B
D5Mit367	B	B	D	B	D	B	D	D	B	B	B	D	D	D	B	D	D	B	D	D	B	B	B	D	B	D	D	D	B	D	B	D	D	B	B	B
D5Mit371	B	B	D	B	D	B	D	D	D	B	B	D	D	D	B	D	D	B	D	D	B	B	B	D	B	D	B	D	B	D	B	D	D	B	B	B
D5Mit372	B	B	D	B	D	B	D	D	D	B	B	D	B	D	D	D	D	B	D	D	B	B	B	D	B	D	B	B	B	B	B	B	D	D	B	D
D5Mit168	B	B	D	D	D	D	D	D	D	B	B	D	B	D	D	D	D	B	D	D	B	B	B	D	B	D	D	B	D	B	B	B	D	D	D	D
D5Mit409	B	D	D	D	D	D	D	D	D	D	B	D	B	D	D	B	B	D	D	B	B	B	B	D	B	D	D	B	D	B	D	B	D	D	D	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D5Mit346	D5Mit348	5	35	4.545	2.395
D5Mit348	D5Mit180	0	35	0.000	0.000
D5Mit180	D5Mit352	8	35	8.696	4.109
D5Mit352	D5Mit79	3	36	2.381	1.504
D5Mit79	D5Mit233	2	36	1.515	1.136
D5Mit233	D5Mit255	3	36	2.381	1.504
D5Mit255	Pgm2	1	10	2.941	3.283
Pgm2	D5Mit356	1	10	2.941	3.283
D5Mit356	D5Mit7	9	36	10.000	4.619
D5Mit7	D5Mit157	3	36	2.381	1.504
D5Mit157	D5Mit24	7	36	6.863	3.287
D5Mit24	D5Mit367	6	36	5.556	2.761
D5Mit367	D5Mit371	2	36	1.515	1.136
D5Mit371	D5Mit372	7	36	6.863	3.287
D5Mit372	D5Mit168	5	36	4.386	2.299
D5Mit168	D5Mit409	7	36	6.863	3.287