Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  7
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343304

Genes

Gene	Assay Type
D7Mit178	PCR amplified length variant
D7Mit114	PCR amplified length variant
Gpi1	PCR amplified length variant
D7Mit227	PCR amplified length variant
D7Mit145	PCR amplified length variant
D7Mit199	PCR amplified length variant
D7Mit297	PCR amplified length variant
D7Mit318	PCR amplified length variant
D7Mit62	PCR amplified length variant
Hbb	PCR amplified length variant
D7Mit126	PCR amplified length variant
D7Mit222	PCR amplified length variant
D7Mit330	PCR amplified length variant
D7Mit333	PCR amplified length variant
D7Mit259	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D7Mit178	D	D	B	D	B	B	B	B	B	D	B	D	B	B	B	B	B	B	B	B	B	B	B	B	D	D	.	B	B	D	B	B	D	D	.	D
D7Mit114	B	D	B	D	B	B	B	D	B	D	B	B	B	B	B	B	B	B	B	B	B	B	B	B	D	D	B	B	D	D	B	D	B	B	D	B
Gpi1	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	D	D	B	D	B	B	.	B
D7Mit227	B	D	B	D	B	B	B	D	B	D	D	B	B	B	B	B	B	D	B	D	D	D	B	B	D	D	D	B	B	D	B	D	D	B	B	B
D7Mit145	B	D	B	B	B	B	B	D	B	D	B	B	B	B	B	B	D	B	B	D	B	B	B	B	D	D	D	B	B	B	B	D	B	B	D	B
D7Mit199	B	D	B	B	B	B	B	D	B	D	D	B	B	B	B	B	D	B	B	D	B	B	B	B	D	D	B	B	B	B	B	B	B	B	D	B
D7Mit297	B	D	B	B	B	B	B	D	B	D	D	B	B	B	B	B	D	B	B	D	B	B	B	B	D	D	B	B	B	B	B	B	B	B	D	B
D7Mit318	B	B	D	B	B	D	B	D	B	D	D	B	B	B	B	B	D	B	B	D	B	B	B	D	B	D	B	B	D	B	D	B	B	B	D	B
D7Mit62	B	B	D	B	B	D	B	D	D	D	D	B	D	B	B	B	D	B	B	D	B	B	B	B	D	D	B	B	B	B	D	B	B	B	D	B
Hbb	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	D	B	B	D	B	B	B	D	D
D7Mit126	B	B	D	B	B	D	B	D	D	D	D	B	D	B	B	B	B	B	D	D	B	D	B	B	D	D	B	D	B	B	D	B	B	B	D	D
D7Mit222	B	B	D	B	B	D	B	D	D	D	B	B	D	B	D	B	D	B	B	D	B	D	D	B	B	D	B	.	B	B	D	D	B	B	D	D
D7Mit330	D	B	D	B	B	D	B	B	D	D	B	B	D	B	D	B	D	B	B	D	B	B	D	B	B	D	B	D	B	B	D	D	D	B	D	D
D7Mit333	D	D	D	B	B	B	B	D	D	B	D	B	D	D	D	B	B	B	B	D	D	D	D	B	D	D	B	D	D	B	D	D	.	D	D	D
D7Mit259	D	D	D	B	B	D	B	D	D	B	D	B	D	B	D	B	B	D	B	D	D	D	D	B	D	D	B	D	D	B	D	D	D	D	D	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D7Mit178	D7Mit114	8	34	9.091	4.344
D7Mit114	Gpi1	1	9	3.333	3.771
Gpi1	D7Mit227	2	9	8.333	7.795
D7Mit227	D7Mit145	9	36	10.000	4.619
D7Mit145	D7Mit199	3	36	2.381	1.504
D7Mit199	D7Mit297	0	36	0.000	0.000
D7Mit297	D7Mit318	7	36	6.863	3.287
D7Mit318	D7Mit62	5	36	4.386	2.299
D7Mit62	Hbb	2	10	7.143	6.454
Hbb	D7Mit126	0	10	0.000	0.000
D7Mit126	D7Mit222	7	35	7.143	3.450
D7Mit222	D7Mit330	4	35	3.448	1.958
D7Mit330	D7Mit333	12	35	17.647	8.502
D7Mit333	D7Mit259	4	35	3.448	1.958