Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  12
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343309

Genes

Gene	Assay Type
D12Mit182	PCR amplified length variant
D12Mit105	PCR amplified length variant
D12Mit234	PCR amplified length variant
D12Mit242	PCR amplified length variant
D12Mit136	PCR amplified length variant
D12Mit46	PCR amplified length variant
D12Mit2	PCR amplified length variant
D12Mit172	PCR amplified length variant
D12Mit88	PCR amplified length variant
D12Mit114	PCR amplified length variant
D12Mit14	PCR amplified length variant
D12Mit239	PCR amplified length variant
D12Mit259	PCR amplified length variant
D12Mit289	PCR amplified length variant
D12Mit18	PCR amplified length variant
D12Mit263	PCR amplified length variant
D12Mit150a	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D12Mit182	B	D	B	B	D	D	D	D	B	D	B	B	B	B	D	D	D	D	D	B	D	B	B	B	D	D	D	D	B	D	D	B	D	D	B	B
D12Mit105	B	D	B	B	B	D	D	D	B	B	B	B	B	B	D	D	D	D	D	B	D	B	B	B	B	D	D	D	B	D	D	B	D	D	B	D
D12Mit234	B	D	B	B	B	D	D	D	B	B	B	B	B	B	D	D	D	D	D	B	D	B	B	B	B	D	D	D	B	D	D	B	D	D	B	D
D12Mit242	B	D	B	B	B	D	B	D	B	B	B	B	B	B	D	D	D	D	D	B	D	B	B	B	B	D	D	D	B	D	D	B	D	D	B	D
D12Mit136	B	D	B	B	B	D	B	D	B	D	D	B	B	B	D	D	D	D	D	B	D	B	B	B	D	D	D	D	B	D	D	B	D	D	B	D
D12Mit46	D	D	B	B	B	D	B	D	B	B	D	B	B	D	D	D	D	D	D	B	D	D	B	B	D	D	D	D	B	D	D	B	D	D	B	D
D12Mit2	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	B	D	D	D	D	D	B	D
D12Mit172	B	D	B	B	D	D	B	B	B	B	D	B	B	D	D	B	D	D	D	B	D	B	D	B	D	D	D	D	.	D	B	D	D	D	B	B
D12Mit88	D	B	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	D	D	D	D	D	D	B	D	D	B	D	D	D	B	D	D	D	B	B
D12Mit114	B	B	B	B	D	D	B	B	D	B	D	B	B	D	D	B	D	D	D	D	D	D	D	B	D	D	B	B	.	D	B	D	.	D	D	B
D12Mit14	B	B	B	B	D	B	B	D	D	B	D	B	B	B	D	B	B	B	D	D	D	D	B	B	D	D	B	B	D	D	D	D	.	D	B	B
D12Mit239	B	B	B	B	D	B	B	D	D	B	D	B	B	D	D	B	B	D	B	D	D	D	B	B	D	D	D	B	D	B	D	D	D	D	B	B
D12Mit259	B	B	B	B	D	B	B	D	B	B	D	B	B	D	D	B	B	D	B	D	D	D	B	B	D	D	D	B	D	B	D	D	D	.	B	B
D12Mit289	B	B	B	D	D	D	D	B	B	B	D	D	B	D	D	B	B	B	D	D	D	D	B	D	B	D	D	B	D	B	D	D	D	D	B	B
D12Mit18	B	B	B	D	B	D	D	D	B	B	D	D	D	B	D	B	B	B	D	B	D	D	B	D	D	D	D	B	D	.	D	D	D	D	B	B
D12Mit263	B	B	B	D	B	D	D	D	B	B	D	D	D	B	D	B	B	B	D	B	D	D	B	D	D	D	D	B	D	.	D	D	D	D	B	B
D12Mit150a	B	B	B	D	B	D	D	D	B	B	D	D	D	B	B	B	B	B	D	B	B	D	B	D	D	D	D	B	D	.	D	D	D	D	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D12Mit182	D12Mit105	4	36	3.333	1.886
D12Mit105	D12Mit234	0	36	0.000	0.000
D12Mit234	D12Mit242	1	36	0.725	0.746
D12Mit242	D12Mit136	3	36	2.381	1.504
D12Mit136	D12Mit46	4	36	3.333	1.886
D12Mit46	D12Mit2	1	10	2.941	3.283
D12Mit2	D12Mit172	2	9	8.333	7.795
D12Mit172	D12Mit88	7	35	7.143	3.450
D12Mit88	D12Mit114	4	34	3.571	2.037
D12Mit114	D12Mit14	8	34	9.091	4.344
D12Mit14	D12Mit239	5	35	4.545	2.395
D12Mit239	D12Mit259	1	35	0.746	0.768
D12Mit259	D12Mit289	9	35	10.465	4.894
D12Mit289	D12Mit18	6	35	5.769	2.886
D12Mit18	D12Mit263	0	35	0.000	0.000
D12Mit263	D12Mit150a	2	35	1.562	1.173