Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  16
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343313

Genes

Gene	Assay Type
D16Mit9	PCR amplified length variant
D16Mit88	PCR amplified length variant
D16Mit165	PCR amplified length variant
D16Mit103	PCR amplified length variant
D16Mit12	PCR amplified length variant
D16Mit5	PCR amplified length variant
D16Mit47	PCR amplified length variant
D16Mit173	PCR amplified length variant
D16Mit188	PCR amplified length variant
D16Mit50	PCR amplified length variant
D16Mit152	PCR amplified length variant
D16Mit106	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D16Mit9	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	B	D	D	B	B	B
D16Mit88	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	D	D	D	B	B	D
D16Mit165	B	D	B	D	B	B	D	B	B	D	B	B	D	D	D	B	B	D	D	D	B	B	D	D	B	D	.	D	D	D	D	D	D	B	B	D
D16Mit103	B	B	B	B	D	B	D	B	B	B	B	D	B	D	D	B	B	D	D	D	D	B	D	D	D	D	.	B	D	D	D	B	B	D	B	B
D16Mit12	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	.	.	.	.	.	.	.	.	.	.	.	B	B	B	D	D	B	B	D	B	B
D16Mit5	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B	D	B	B	D	D	D	D	B	B	B	B
D16Mit47	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	B	D	D	D	D	B	B	D	B
D16Mit173	B	B	B	B	D	B	D	B	B	D	D	D	B	D	D	D	B	B	D	D	B	B	D	B	B	D	B	D	D	D	D	D	B	B	D	.
D16Mit188	B	D	D	B	D	B	D	D	B	B	D	D	B	D	D	B	B	D	D	D	D	B	D	B	B	D	B	D	D	D	D	D	B	D	B	B
D16Mit50	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	D	D	D	D	D	B	D	B	B
D16Mit152	B	D	D	B	B	B	D	D	B	D	D	D	B	D	D	D	B	D	D	D	D	B	D	B	B	D	B	D	D	D	D	D	B	D	B	B
D16Mit106	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	D	.	D	D	D	B	D	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D16Mit9	D16Mit88	2	9	8.333	7.795
D16Mit88	D16Mit165	0	9	0.000	0.000
D16Mit165	D16Mit103	13	35	20.968	10.411
D16Mit103	D16Mit12	1	10	2.941	3.283
D16Mit12	D16Mit5	3	10	13.636	11.976
D16Mit5	D16Mit47	1	10	2.941	3.283
D16Mit47	D16Mit173	1	9	3.333	3.771
D16Mit173	D16Mit188	9	35	10.465	4.894
D16Mit188	D16Mit50	0	10	0.000	0.000
D16Mit50	D16Mit152	0	10	0.000	0.000
D16Mit152	D16Mit106	0	9	0.000	0.000