Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  19
• Reference
  J:49829 Taylor BA, et al., Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps. Mamm Genome. 1999 Apr;10(4):335-48
• ID
  MGI:1343316

Genes

Gene	Assay Type
D19Mit109	PCR amplified length variant
D19Mit61	PCR amplified length variant
D19Mit28	PCR amplified length variant
D19Mit41	PCR amplified length variant
D19Mit40	PCR amplified length variant
D19Mit13	PCR amplified length variant
D19Mit19	PCR amplified length variant
D19Mit89	PCR amplified length variant
D19Mit10	PCR amplified length variant
D19Mit1	PCR amplified length variant
D19Mit34	PCR amplified length variant
D19Mit35	PCR amplified length variant
D19Mit6	PCR amplified length variant

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32	33	34	35	36	37	38	39	40	41	42
D19Mit109	B	B	B	D	D	B	B	B	B	B	B	B	B	B	B	B	B	D	D	B	D	B	B	B	B	D	B	D	D	B	D	D	D	B	D	B
D19Mit61	B	.	.	.	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	D	B	B	.	B	.	D	B	D	D	D	D	D	B	D	B
D19Mit28	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	D	D	D	D	D	B	D	B
D19Mit41	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	D	D	D	D	D	B	D	B
D19Mit40	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	B	.	B	D	D	B	D	B
D19Mit13	D	D	B	D	D	B	D	B	D	B	B	B	B	B	D	B	B	D	B	B	B	B	D	D	B	D	D	B	B	B	D	D	D	B	.	B
D19Mit19	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	B	B	B	D	D	D	B	.	D
D19Mit89	D	B	B	D	D	B	D	B	B	B	B	B	B	D	D	D	B	D	B	B	B	B	B	B	B	D	D	B	B	B	D	D	D	B	.	D
D19Mit10	D	B	B	D	D	B	D	B	B	B	B	B	B	D	D	D	B	D	B	B	D	D	B	B	B	D	D	B	B	B	D	D	D	B	.	D
D19Mit1	D	B	B	D	D	B	D	B	B	B	B	B	B	D	B	B	B	D	B	B	B	B	B	B	B	D	D	D	B	D	B	D	D	B	B	D
D19Mit34	D	B	B	D	D	B	D	B	B	B	B	B	B	D	B	B	B	D	B	B	B	B	B	B	B	D	D	D	B	D	B	D	D	B	B	D
D19Mit35	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	B	D	B	D	D	B	B	D
D19Mit6	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	B	D	D	D	B	B	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D19Mit109	D19Mit61	3	17	6.000	4.275
D19Mit61	D19Mit28	0	10	0.000	0.000
D19Mit28	D19Mit41	0	10	0.000	0.000
D19Mit41	D19Mit40	2	9	8.333	7.795
D19Mit40	D19Mit13	1	8	3.846	4.428
D19Mit13	D19Mit19	1	9	3.333	3.771
D19Mit19	D19Mit89	0	9	0.000	0.000
D19Mit89	D19Mit10	2	35	1.562	1.173
D19Mit10	D19Mit1	7	35	7.143	3.450
D19Mit1	D19Mit34	0	36	0.000	0.000
D19Mit34	D19Mit35	0	10	0.000	0.000
D19Mit35	D19Mit6	2	10	7.143	6.454