Mapping Data

Experiment

• Experiment
  TEXT
• Chromosome
  11
• Reference
  J:51104 Mohlke KL, et al., Comparative mapping of distal murine chromosome 11 and human 17q21.3 in a region containing a modifying locus for murine plasma von Willebrand factor level. Genomics. 1998 Nov 15;54(1):19-30
• ID
  MGI:1343772

Genes

Gene	Assay Type
Pdk2	overlapping clones, PCR amplified length variant
Slc35b1	overlapping clones, PCR amplified length variant
D11Moh1	overlapping clones, PCR amplified length variant
D11Moh2	overlapping clones, PCR amplified length variant
D11Moh32	overlapping clones, PCR amplified length variant
Ngfr	overlapping clones, PCR amplified length variant
Spop	overlapping clones, PCR amplified length variant
D11Moh49	overlapping clones, PCR amplified length variant
D11Mit263	overlapping clones, PCR amplified length variant
D11Moh3	overlapping clones, PCR amplified length variant
D11Moh33	overlapping clones, PCR amplified length variant
D11Moh4	overlapping clones, PCR amplified length variant
Phb1	overlapping clones, PCR amplified length variant
D11Moh5	overlapping clones, PCR amplified length variant
D11Moh6	overlapping clones, PCR amplified length variant
Gngt2	overlapping clones, PCR amplified length variant
Phospho1	overlapping clones, PCR amplified length variant
D11Moh37e	overlapping clones, PCR amplified length variant
D11Moh7	overlapping clones, PCR amplified length variant
D11Moh38e	overlapping clones, PCR amplified length variant
Mvwf	visible phenotype
B4galnt2	overlapping clones, PCR amplified length variant
D11Moh39e	overlapping clones, PCR amplified length variant
D11Moh8	overlapping clones, PCR amplified length variant
D11Moh9	overlapping clones, PCR amplified length variant
D11Moh46	overlapping clones, PCR amplified length variant
Igf2bp1	overlapping clones, PCR amplified length variant
Igf2bp1	overlapping clones, PCR amplified length variant
D11Moh41e	overlapping clones, PCR amplified length variant
D11Moh10	overlapping clones, PCR amplified length variant
D11Moh11	overlapping clones, PCR amplified length variant
D11Moh12	overlapping clones, PCR amplified length variant
D11Moh13	overlapping clones, PCR amplified length variant
Igf2bp1	overlapping clones, PCR amplified length variant
D11Moh42e	overlapping clones, PCR amplified length variant
D11Moh14	overlapping clones, PCR amplified length variant
D11Moh15	overlapping clones, PCR amplified length variant
D11Moh16	overlapping clones, PCR amplified length variant
Gip	overlapping clones, PCR amplified length variant
D11Moh17	overlapping clones, PCR amplified length variant
D11Moh18	overlapping clones, PCR amplified length variant
Snf8	overlapping clones, PCR amplified length variant
D11Moh19	overlapping clones, PCR amplified length variant
D11Moh20	overlapping clones, PCR amplified length variant
Ube2z	overlapping clones, PCR amplified length variant
D11Moh21	overlapping clones, PCR amplified length variant
Atp6v0a1	overlapping clones, PCR amplified length variant
D11Moh22	overlapping clones, PCR amplified length variant
Calcoco2	overlapping clones, PCR amplified length variant
D11Moh23	overlapping clones, PCR amplified length variant
D11Moh24	overlapping clones, PCR amplified length variant
Ttll6	overlapping clones, PCR amplified length variant
Ttll6	overlapping clones, PCR amplified length variant
D11Moh29	overlapping clones, PCR amplified length variant
D11Moh30	overlapping clones, PCR amplified length variant
D11Moh31	overlapping clones, PCR amplified length variant
Hoxb9	overlapping clones, PCR amplified length variant
D11Mit54	overlapping clones, PCR amplified length variant
Hoxb4	overlapping clones
Hoxb1	overlapping clones
Scrn2	overlapping clones, PCR amplified length variant
Mrpl27

Notes

• Experiment
  The authors used a combination of intercross data and a variety of physical mapping methods to narrow the Mvwf phenotype region to a 300kb segment between D11Moh4 and D11Moh23 on mouse Chromosome 11. YAC and P1 end clones as well as transcripts identified from the conserved syntenic region of human Chromosome 16 were used as markers in the construction of the physical map. The order of the loci on mouse Chromosome 11 is: [Pkd2, Slc35b1] - D11Moh1, D11Moh2 - [D11Moh32, Ngfr, Spop, D11Moh49, D11Moh3, D11Moh33, D11Moh4, D11Mit263] - [Phb, D11Moh5, D11Moh6] - [Gngt2, Phospho1, D11Moh37e - D11Moh7 - D11Moh38e - 3' B4galnt2 - 5' D11Moh39e - D11Moh8 - D11Moh9 - [D11Moh46, Igf2bp1, D11Moh40e, D11Moh41e] - D11Moh10 - D11Moh12 - D11Moh13 - 3' Igf2bp1 - 5' - D11Moh42e -D11Moh14 - D11Moh15 - D11Moh16 - 5' - Gip - 3' - D11Moh17 - D11Moh18 - Snf8 - D11Moh19 - Ube2z - D11Moh21 - Atpv0a1 - D11Moh22 - Ndp52 - D11Moh23 - D11Moh24 - D11Moh43e - D11Moh44e - D11Moh29 - D11Moh30 - D11Moh31 - Hoxb9 - D11Mit54 - Hoxb4 - Hoxb1 -D11Moh48. Loci indicated within the brackets are not physically ordered with respect to each other. In a subsequent publication (J:52069), the authors identified a gain of function mechanism in the Galgt2 gene as responsible for the Mvwf phenotype. D11Moh27 was later renamed Mrpl27 also mapped withinthis contig.