Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:56825 Kozak CA, et al., Identification and genetic mapping of differentially expressed genes in mice differing at the If1 interferon regulatory locus. Mamm Genome. 1999 Sep;10(9):853-7
• ID
  MGI:1345408

Genes

Gene	Assay Type	Description
Spi1
Rpl37a-rs3	Southern analysis	L37a probe
Map1a
Snap25
Rpl37a-rs4	Southern analysis	L37a probe
Gdf5
Src
DXHXS648e-rs1	Southern analysis	QM probe
Cd40

CROSS

• Type
  Backcross, female
• Female Parent
  <n> <n> <n> <n> <n> <n> <n> <n> <n>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (NFS/N x M. spretus)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  M. spretus or C58/J
• Mapping Panel
  Kozak FvC58 + FvSpr
• Allele 1
  n from NFS/N
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Spi1	Rpl37a-rs3	3	58
Rpl37a-rs3	Map1a	4	44
Snap25	Rpl37a-rs4	5	50
Rpl37a-rs4	Gdf5	0	45
Rpl37a-rs4	Src	0	55
Src	DXHXS648e-rs1	3	20
DXHXS648e-rs1	Cd40	1	19

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Spi1	Rpl37a-rs3	3	61	4.918	2.769
Rpl37a-rs3	Map1a	4	48	8.333	3.989
Snap25	Rpl37a-rs4	5	55	9.091	3.876
Rpl37a-rs4	Gdf5	0	45	0.000	0.000
Rpl37a-rs4	Src	0	55	0.000	0.000
Src	DXHXS648e-rs1	3	23	13.043	7.022
DXHXS648e-rs1	Cd40	1	20	5.000	4.873