Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  16
• Reference
  J:56825 Kozak CA, et al., Identification and genetic mapping of differentially expressed genes in mice differing at the If1 interferon regulatory locus. Mamm Genome. 1999 Sep;10(9):853-7
• ID
  MGI:1345479

Genes

Gene	Assay Type	Description
Prm1
Rpl37a-rs11	Southern analysis	L37a probe
Igl
Gap43
App
Rps8-rs20	Southern analysis	S8 probe
Ifnar1
Pcp4

CROSS

• Type
  Backcross, female
• Female Parent
  <n> <n> <n> <n> <n> <n> <n> <n>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (NFS/N x M. spretus)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  M. spretus or C58/J
• Mapping Panel
  Kozak FvC58 + FvSpr
• Allele 1
  n from NFS/N
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Prm1	Rpl37a-rs11	3	69
Rpl37a-rs11	Igl	0	74
Rpl37a-rs11	Gap43	11	50
App	Rps8-rs20	2	66
Rps8-rs20	Ifnar1	0	74
Rps8-rs20	Pcp4	2	65

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Prm1	Rpl37a-rs11	3	72	4.167	2.355
Rpl37a-rs11	Igl	0	74	0.000	0.000
Rpl37a-rs11	Gap43	11	61	18.033	4.923
App	Rps8-rs20	2	68	2.941	2.049
Rps8-rs20	Ifnar1	0	74	0.000	0.000
Rps8-rs20	Pcp4	2	67	2.985	2.079