Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  X
• Reference
  J:56825 Kozak CA, et al., Identification and genetic mapping of differentially expressed genes in mice differing at the If1 interferon regulatory locus. Mamm Genome. 1999 Sep;10(9):853-7
• ID
  MGI:1345481

Genes

Gene	Assay Type	Description
Timp1
Rps8-rs21	Southern analysis	S8 probe
Hprt1
Opn1mw
Hmgn1-rs6
Rpl10	Southern analysis	QM probe
Oat-rs1
Zfx
Grpr
Tmsb4x	Southern analysis	THYB4 probe
Ftl1-rs11

CROSS

• Type
  Backcross, female
• Female Parent
  <n> <n> <n> <n> <n> <n> <n> <n> <n> <n> <n>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (NFS/N x M. spretus)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/Y
• Strain
  M. spretus or C58/J
• Mapping Panel
  Kozak FvC58 + FvSpr
• Allele 1
  n from NFS/N
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Timp1	Rps8-rs21	5	58
Rps8-rs21	Hprt1	5	62
Opn1mw	Hmgn1-rs6	1	66
Hmgn1-rs6	Rpl10	1	54
Rpl10	Oat-rs1	0	47
Rpl10	Zfx	1	66
Grpr	Tmsb4x	4	66
Tmsb4x	Ftl1-rs11	1	53

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Timp1	Rps8-rs21	5	63	7.937	3.406
Rps8-rs21	Hprt1	5	67	7.463	3.210
Opn1mw	Hmgn1-rs6	1	67	1.493	1.481
Hmgn1-rs6	Rpl10	1	55	1.818	1.802
Rpl10	Oat-rs1	0	47	0.000	0.000
Rpl10	Zfx	1	67	1.493	1.481
Grpr	Tmsb4x	4	70	5.714	2.774
Tmsb4x	Ftl1-rs11	1	54	1.852	1.835