Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  4
• Reference
  J:49605 Mori M, et al., Genetic profile of the SMXA recombinant inbred mouse strains revealed with restriction landmark genomic scanning. Mamm Genome. 1998 Sep;9(9):695-709
• ID
  MGI:1352390

Genes

Gene	Assay Type	Description
D4Rik149	RLGS	NdSM294
D4Rik150	RLGS	NdSM294
D4Mit101
D4Rik151	RLGS	NaA18
D4Rik152	RLGS	NaSM135
D4Rik153	RLGS	NaA153
D4Rik154	RLGS	NaA171
D4Rik155	RLGS	NaSM41
D4Rik156	RLGS	NdSM228
D4Rik157	RLGS	NaA98
D4Rik158	RLGS	NdA126
D4Rik159	RLGS	NaA204
D4Rik160	RLGS	NaSM161
D4Rik161	RLGS	NaA196
D4Rik162	RLGS	NdSM187
D4Rik163	RLGS	NdA138
D4Rik164	RLGS	NaSM43
D4Mit122
D4Rik165	RLGS	NaSM170
D4Rik166	RLGS	NaA195
D4Rik167	RLGS	NaA114
D4Rik168	RLGS	NdSM27
D4Rik169	RLGS	NdSM230
D4Rik170	RLGS	NdA169
D4Rik171	RLGS	NaSM50
D4Rik172	RLGS	NaA52
D4Rik173	RLGS	NaSM8
D4Rik174	RLGS	NaA5
D4Rik175	RLGS	naSm160
D4Rik176	RLGS	NaA188
D4Rik177	RLGS	NaSM68
D4Rik178	RLGS	NaSM21
D4Rik179	RLGS	NaA22
D4Rik180	RLGS	NaSM104
D4Rik181	RLGS	NdSM211
D4Rik182	RLGS	NdA168
D4Rik183	RLGS	NdSM58
D4Rik184	RLGS	NaSM6
D4Rik185	RLGS	NnaA7
D4Rik186	RLGS	NnaSM176
D4Rik187	RLGS	NaA198
D4Rik188	RLGS	NaSM189
D4Rik189	RLGS	NdA35
D4Rik190	RLGS	NdSM278
D4Rik191	RLGS	NdA201
D4Rik192	RLGS	NaSM80
D4Rik193	RLGS	NaA79
D4Rik194	RLGS	NdSM113
D4Rik195	RLGS	NaA145
D4Rik196	RLGS	NaSM71
D4Rik197	RLGS	NaA71
D4Rik198	RLGS	NaSM27
D4Rik199	RLGS	NaA29
D4Rik200	RLGS	NdSM12
D4Rik201	RLGS	NdSM143
D4Rik202	RLGS	NdA15
D4Rik203	RLGS	NaSM64
D4Rik204	RLGS	NaA173
D4Rik205	RLGS	NaA148
D4Mit180
D4Rik206	RLGS	NdSM252
D4Rik207	RLGS	NaM172
D4Rik208	RLGS	NdSM18
D4Rik209	RLGS	NdA101
D4Rik210	RLGS	NdSM262
D4Rik211	RLGS	NdA196

RI

• Origin
  SM/J x A/J
• Designation
  SMXA
• Abbreviation 1
  A
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	3	4	5	6	7	8	9	10	11	12	14	15	16	17	18	19	20	21	21d	22	23	24	25	26	27	29	30
D4Rik149	S	S	S	S	S	A	A	A	S	A	A	S	S	A	S	S	A	.	S	.	S	A	A	S	S	A	A	A
D4Rik150	S	S	S	S	S	A	A	A	S	A	A	S	S	A	S	S	A	.	S	.	S	A	A	S	S	A	A	A
D4Mit101	S	S	S	S	S	A	A	A	S	A	A	S	S	A	S	S	A	.	S	.	S	A	A	S	S	A	A	A
D4Rik151	S	S	S	S	A	S	S	A	S	A	S	S	S	A	S	S	A	.	S	.	S	S	A	S	S	.	S	A
D4Rik152	S	A	S	S	A	S	S	A	S	A	S	S	S	S	A	S	A	.	S	.	A	A	A	S	S	.	S	A
D4Rik153	S	A	S	S	A	S	S	A	S	A	S	S	S	S	A	S	A	.	S	.	A	A	A	S	S	.	S	A
D4Rik154	S	A	S	S	A	S	S	A	S	A	S	S	S	S	A	S	A	.	S	.	A	A	A	S	S	S	S	A
D4Rik155	S	A	S	A	A	S	S	A	S	A	S	S	A	S	A	S	A	.	S	.	A	A	A	S	S	S	A	A
D4Rik156	S	A	S	A	A	S	S	A	S	A	S	S	A	S	A	S	A	.	S	.	A	A	A	S	S	S	A	A
D4Rik157	S	A	S	A	A	S	S	A	S	A	S	S	A	S	A	S	A	.	S	.	A	A	A	S	S	.	A	A
D4Rik158	S	A	S	A	A	S	S	A	S	A	S	S	A	S	A	S	A	.	S	.	A	A	A	S	S	S	A	A
D4Rik159	S	A	S	S	A	S	S	A	S	A	S	S	A	S	A	S	A	.	A	.	A	A	A	S	S	S	A	A
D4Rik160	S	A	S	S	A	A	S	A	S	S	S	S	A	S	A	S	A	.	A	.	A	A	A	S	S	S	A	A
D4Rik161	S	A	S	S	A	A	S	A	S	S	S	S	A	S	A	S	A	.	A	.	A	A	A	S	S	S	A	A
D4Rik162	A	S	A	S	A	A	S	S	S	A	S	S	A	S	A	A	A	.	A	.	A	A	A	S	S	S	A	A
D4Rik163	A	S	A	S	A	A	S	S	S	A	S	S	A	S	A	A	A	.	A	.	A	A	A	S	S	S	A	A
D4Rik164	A	S	A	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Mit122	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik165	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik166	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik167	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik168	A	.	S	.	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik169	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	S	.	A	.	A	A	S	.	S	S	A	A
D4Rik170	A	S	S	A	A	A	S	S	S	A	S	A	A	S	S	A	.	.	.	.	A	A	S	.	S	S	A	A
D4Rik171	A	S	S	A	A	A	S	S	S	A	A	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik172	A	S	S	A	A	A	S	S	S	A	A	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik173	A	S	S	A	A	A	S	S	S	A	A	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik174	A	S	S	A	A	A	S	S	S	A	A	A	A	S	S	A	S	.	A	.	A	A	S	S	S	S	A	A
D4Rik175	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik176	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik177	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik178	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik179	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik180	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik181	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik182	A	S	S	A	A	S	S	S	A	S	A	A	A	S	S	A	S	.	S	.	A	A	S	A	A	S	A	S
D4Rik183	A	S	A	A	A	S	S	S	A	S	S	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	S
D4Rik184	.	.	.	.	.	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik185	.	.	.	.	.	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik186	A	S	A	A	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik187	A	S	A	A	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik188	A	S	A	A	A	S	S	S	.	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	.	.	A
D4Rik189	A	S	A	A	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik190	A	S	A	S	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik191	A	S	A	S	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik192	A	S	A	S	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik193	A	S	A	S	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik194	A	S	A	S	A	S	S	S	A	S	A	S	A	S	S	A	S	.	S	.	S	S	A	A	A	S	A	A
D4Rik195	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik196	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik197	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik198	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik199	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik200	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik201	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik202	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik203	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	A	A
D4Rik204	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	S	A
D4Rik205	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	.	S	A
D4Mit180	A	S	A	S	A	S	S	S	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	A	S	S	A
D4Rik206	A	S	A	S	A	S	S	S	A	A	S	S	A	S	.	A	S	.	S	.	S	A	S	A	S	S	S	A
D4Rik207	A	S	A	S	A	S	S	A	A	A	S	S	A	S	S	A	S	.	S	.	S	A	S	A	S	S	.	A
D4Rik208	S	S	A	S	A	S	S	A	S	A	A	S	A	S	S	S	S	.	S	.	S	A	S	A	S	S	S	A
D4Rik209	S	S	A	S	A	S	S	A	S	A	A	S	A	S	S	S	S	.	S	.	S	A	S	A	S	S	S	A
D4Rik210	S	S	A	S	S	S	S	A	S	A	A	S	A	S	S	S	S	.	A	.	S	A	S	A	S	S	S	A
D4Rik211	S	S	A	S	S	S	S	A	S	A	A	S	A	S	S	S	S	.	A	.	S	A	S	A	S	S	S	A

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D4Rik149	D4Rik150	0	26	0.000	0.000
D4Rik150	D4Mit101	0	26	0.000	0.000
D4Mit101	D4Rik151	6	25	9.375	5.213
D4Rik151	D4Rik152	5	25	7.143	4.082
D4Rik152	D4Rik153	0	25	0.000	0.000
D4Rik153	D4Rik154	0	25	0.000	0.000
D4Rik154	D4Rik155	3	26	3.488	2.291
D4Rik155	D4Rik156	0	26	0.000	0.000
D4Rik156	D4Rik157	0	25	0.000	0.000
D4Rik157	D4Rik158	0	25	0.000	0.000
D4Rik158	D4Rik159	2	26	2.174	1.670
D4Rik159	D4Rik160	2	26	2.174	1.670
D4Rik160	D4Rik161	0	26	0.000	0.000
D4Rik161	D4Rik162	6	26	8.824	4.832
D4Rik162	D4Rik163	0	26	0.000	0.000
D4Rik163	D4Rik164	5	26	6.757	3.817
D4Rik164	D4Mit122	1	26	1.020	1.062
D4Mit122	D4Rik165	0	26	0.000	0.000
D4Rik165	D4Rik166	0	26	0.000	0.000
D4Rik166	D4Rik167	0	26	0.000	0.000
D4Rik167	D4Rik168	0	24	0.000	0.000
D4Rik168	D4Rik169	0	23	0.000	0.000
D4Rik169	D4Rik170	0	23	0.000	0.000
D4Rik170	D4Rik171	1	23	1.163	1.217
D4Rik171	D4Rik172	0	26	0.000	0.000
D4Rik172	D4Rik173	0	26	0.000	0.000
D4Rik173	D4Rik174	0	26	0.000	0.000
D4Rik174	D4Rik175	7	26	11.290	6.119
D4Rik175	D4Rik176	0	26	0.000	0.000
D4Rik176	D4Rik177	0	26	0.000	0.000
D4Rik177	D4Rik178	0	26	0.000	0.000
D4Rik178	D4Rik179	0	26	0.000	0.000
D4Rik179	D4Rik180	0	26	0.000	0.000
D4Rik180	D4Rik181	0	26	0.000	0.000
D4Rik181	D4Rik182	0	26	0.000	0.000
D4Rik182	D4Rik183	6	26	8.824	4.832
D4Rik183	D4Rik184	2	21	2.778	2.180
D4Rik184	D4Rik185	0	21	0.000	0.000
D4Rik185	D4Rik186	0	21	0.000	0.000
D4Rik186	D4Rik187	0	26	0.000	0.000
D4Rik187	D4Rik188	0	23	0.000	0.000
D4Rik188	D4Rik189	0	23	0.000	0.000
D4Rik189	D4Rik190	1	26	1.020	1.062
D4Rik190	D4Rik191	0	26	0.000	0.000
D4Rik191	D4Rik192	0	26	0.000	0.000
D4Rik192	D4Rik193	0	26	0.000	0.000
D4Rik193	D4Rik194	0	26	0.000	0.000
D4Rik194	D4Rik195	4	26	5.000	2.990
D4Rik195	D4Rik196	0	26	0.000	0.000
D4Rik196	D4Rik197	0	26	0.000	0.000
D4Rik197	D4Rik198	0	26	0.000	0.000
D4Rik198	D4Rik199	0	26	0.000	0.000
D4Rik199	D4Rik200	0	26	0.000	0.000
D4Rik200	D4Rik201	0	26	0.000	0.000
D4Rik201	D4Rik202	0	26	0.000	0.000
D4Rik202	D4Rik203	0	26	0.000	0.000
D4Rik203	D4Rik204	1	26	1.020	1.062
D4Rik204	D4Rik205	0	25	0.000	0.000
D4Rik205	D4Mit180	0	25	0.000	0.000
D4Mit180	D4Rik206	1	25	1.064	1.109
D4Rik206	D4Rik207	1	24	1.111	1.160
D4Rik207	D4Rik208	4	25	5.263	3.174
D4Rik208	D4Rik209	0	26	0.000	0.000
D4Rik209	D4Rik210	2	26	2.174	1.670
D4Rik210	D4Rik211	0	26	0.000	0.000