Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  X
• Reference
  J:62168 Means GD, et al., A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation. Genomics. 2000 May 1;65(3):213-23
• ID
  MGI:1859965

Genes

Gene	Allele
Akap4
DXMit123
Clcn5
Smgc
DXImx44e
DXImx45e
DXImx43e
Clcn5
DXImx34
Usp27x
DXMit55
DXImx8
DXImx12
Ppp1r3f
Ccdc22
Cacna1f
DXMit26
Syp
Prickle3
Plp2
Magix
Gpkow
Ppia-ps1
Wdr45
Praf2
Ccdc120
Smt3h2-ps
Tfe3
Gripap1
Kcnd1
DXImx3
Otud5
Pim2
Slc35a2
Timm17b
DXImx17
Pqbp1
Hdac6
Psmb6-ps
Gata1
Suv39h1
Was
Psmb7-ps2
Wdr13
Rbm3
Tbc1d25
Ebp
Porcn
Ftsj1
DXMit161
Foxp3	Foxp3^sf
Xk
DXMit136
DXMit124a
DXImx1
DXImx10
DXImx11
DXImx13
DXImx14
DXImx15
DXImx16
DXImx18
DXImx19
DXImx2
DXImx20
DXImx21
DXImx22
DXImx23
DXImx25
DXImx26
DXImx27
DXImx28
DXImx29
DXImx30
DXImx31
DXImx32
DXImx33
DXImx35
DXImx36
DXImx37
DXImx4
DXImx7
DXImx9
DXImx5

Notes

• Experiment
  The authors constructed a physical map of a 2.0 Mb region on the mouse X Chromosome around the Foxp3^sf locus between the markers DXMit123 and DXMit136 (~0.8 cM to 2.6 cM on the genetic map). The order/orientation of the markers in this region of the mouse Chromosome X were: Akap4 - DXMit123 - Clcn5, - DXImx44e - DXImx45e - DXImx43e - DXImx42e - DXImx34 - Usp27x - DXMit55 - DXImx8 - DXImx12 - Ppp1r3f - DXImx40e - Cacna1f - DXMit26 - 5' - Syp - 3' - Lmo6 - Plp2 - Pdzx - DXImx41e - Ppia-ps - 5'- Wdr45 - 3' - 5' - DXImx39e - 3' - DXImx50e - Smt3h2-ps - 5' - Tcfe3 - 3' - Gripap1 - Kcnd1 - DXImx3 - Otud5 - Pim2 - 5' - Slc35a2 - 3' - Timm17b - DXImx17 - Pqbp1 - 3' - Hdac6 - 5' - Psmb6-ps - 3' - Gata1 - 5' - Suv39h1 - Was - Psmb7-ps2 - 3' -DXHXS7467e - 5' -Rbm3 - 3' - DXHXS7927e - 5' - 3' - Ebp - 5' - Porcn - 3' - Ftsjl - 5' - DXMit161 - Xkh - DXMit136 - DXMit124. The markers listed in this experiemt following D1Xmit124a were also polymophic and mapped withint he Fox3^sf region.