Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  5
• Reference
  J:72229 Hurle B, et al., Physical Mapping of the Mouse Tilted Locus Identifies an Association between Human Deafness Loci DFNA6/14 and Vestibular System Development. Genomics. 2001 Oct;77(3):189-99
• ID
  MGI:2153796

Genes

Gene	Assay Type
Nsg1	overlapping clones, direct sequencing, sequence analysis
Lyar	overlapping clones, direct sequencing, sequence analysis
Tmem128	overlapping clones, direct sequencing, sequence analysis
Drd5	overlapping clones, direct sequencing, sequence analysis
Slc2a9	overlapping clones, direct sequencing, sequence analysis
D5Mit77	overlapping clones, direct sequencing, sequence analysis
Wdr1	overlapping clones, direct sequencing, sequence analysis
Clnk	overlapping clones, direct sequencing, sequence analysis
Clnkos	overlapping clones, direct sequencing, sequence analysis
Otop1
D5Dmo5
D5Dmo1
D5Dmo2
D5Dmo3
D5Dmo4
D5Dmo6
D5Dmo7
D5Dmo8
Wfs1
Stx18
Hs3st1
Prom1
Bst1

Notes

• Experiment
  The authors constructed a physical and transcription map of the tlt locus on Chromosome 5. The physical map was constructed using three fingerprint contigs ctg759, ctg3928 and ctg2753 from the BAC fingerprint map at the Genome Sequence center in British Columbia. The order of markers around the tlt locus was determined to be : centromere - Nsg1 - 5'- Lyar - 3' - 5'-2810021O14Rik - 3' - 5'- Drd5 - 3' - 3'- Slc2a9 - 5' - D5Mit77 - 3'- Wdr1-5' - Clnk - 1700021O21Rik - D5Dmo5.
  
  STS markers were used to Identigy the following Chromosome 5 markers.
  
  Wfs1 = D5Dmo1
  Stx18 = D5Dmo2
  Nsg1 = D5Dmo3
  Drd5 = D5Dmo4
  Clnk = D5Dmo5
  Hs3st1 = D5Dmo6
  Prom1 = D5Dmo7
  Bst1 = D5Dmo8