Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  10
• Reference
  J:72844 Chalhoub N, et al., Physical and transcriptional map of the mouse Chromosome 10 proximal region syntenic to human 6q16-q21. Mamm Genome. 2001 Dec;12(12):887-92
• ID
  MGI:2155341

Genes

Gene	Assay Type
Fyn	overlapping clones, direct sequencing, sequence analysis
Amd1	overlapping clones, direct sequencing, sequence analysis
Wasf1	overlapping clones, direct sequencing, sequence analysis
Gpr6	overlapping clones, direct sequencing, sequence analysis
D10Mit109	overlapping clones, direct sequencing, sequence analysis
Cd164	overlapping clones, direct sequencing, sequence analysis
Sesn1	overlapping clones, direct sequencing, sequence analysis
D10Mit193	overlapping clones, direct sequencing, sequence analysis
Foxo3	overlapping clones, direct sequencing, sequence analysis
D10Mit255	overlapping clones, direct sequencing, sequence analysis
D10Mit254	overlapping clones, direct sequencing, sequence analysis
D10Mit184	overlapping clones, direct sequencing, sequence analysis
Snx3	overlapping clones, direct sequencing, sequence analysis
Nr2e1	overlapping clones, direct sequencing, sequence analysis
D10Mit108	overlapping clones, direct sequencing, sequence analysis
Sec63	overlapping clones, direct sequencing, sequence analysis
Cd24a	overlapping clones, direct sequencing, sequence analysis
D10Mit54	overlapping clones, direct sequencing, sequence analysis
D10Mit215	overlapping clones, direct sequencing, sequence analysis
D10Mit55	overlapping clones, direct sequencing, sequence analysis
Crybg1	overlapping clones, direct sequencing, sequence analysis
D10Mit38	overlapping clones, direct sequencing, sequence analysis
Atg5	overlapping clones, direct sequencing, sequence analysis
Prdm1	overlapping clones, direct sequencing, sequence analysis
D10Mit148	overlapping clones, direct sequencing, sequence analysis
D10Mit216	overlapping clones, direct sequencing, sequence analysis
C87926	overlapping clones, direct sequencing, sequence analysis
Popdc1	overlapping clones, direct sequencing, sequence analysis
D10Mit285	overlapping clones, direct sequencing, sequence analysis
D10Mit194	overlapping clones, direct sequencing, sequence analysis
Ostm1	overlapping clones, direct sequencing, sequence analysis

Notes

• Experiment
  Previous mapping studies presented in J:53815 had localized the gl candidate region to a locus on Chromosome 10 between the Fyn and D10Mit148 markers. The distance between the markers was determined to be Fyn - 1.8 cM - D10Mit184, D10Mit254, D10Mit255, D10Mit108, D10Mit109, D10Mit193 - 0.4 +/- 0.2 cM - D10Mit215, D10Mit54, Cd24a, D10Mit55 - 1.0 +/- 0.3 cM - D10Mit148. In the current study, the authors constructed a physical map of the region using an YAC contig spanning 8.5 Mb. Using this physical map, the authors were able to localize ESTs, STS markers and genes to the region. The order of markers within the gl region was determined to be: Fyn - Amd1 - Wasf1 - Gpr6 - D10Mit109 - Cd164 - Pa26 - D10Mit193 - Foxo3 - D10Mit255 - D10Mit254 - D10Mit184 - Snx3- Nr2e1 - D10Mit108 - Sec63 - Cd24a - D10Mit54 - D10Mit215 - D10Mit55 - Aim1 - D10Mit38 - Apg5l - Prdm1 - D10Mit148 - D10Mit216 - C87926 - Bves - D10Mit285 - D10Mit194 - D10Mit148.