Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  12
• Reference
  J:80573 Wang CC, et al., Conserved linkage of NK-2 homeobox gene pairs Nkx2-2/2-4 and Nkx2-1/2-9 in mammals. Mamm Genome. 2000 Jun;11(6):466-8
• ID
  MGI:2450290

Genes

Gene	Assay Type	Description
Foxg1
Nkx2-9	Southern analysis	Nkx2-9 probe 1
Foxa1
Sos2

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Foxg1	Nkx2-9	Foxa1	Sos2
64	b	b	b	b
53	s	s	s	s
1	s	b	b	b
3	b	s	s	s
0	s	s	b	b
1	b	b	s	s
2	s	s	s	b
4	b	b	b	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Foxg1	Nkx2-9	4	128	3.125	1.538
Nkx2-9	Foxa1	1	128	0.781	0.778
Foxa1	Sos2	6	128	4.688	1.868