Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  6
• Reference
  J:90940 Manenti G, et al., Haplotype sharing suggests that a genomic segment containing six genes accounts for the pulmonary adenoma susceptibility 1 (Pas1) locus activity in mice. Oncogene. 2004 May 27;23(25):4495-504
• ID
  MGI:3575829

Genes

Gene
D6Int30
D6Int4
D6Int32a
D6Int32b
D6Int32c
D6Int33
D6Int54
D6Int8
D6Int37a
D6Int38
D6Int84
D6Int40
D6Int95
D6Int96
D6Int41
D6Int102
D6Int44
D6Int126
D6Int127
D6Int128
D6Int130
D6Int131
D6Int134
D6Int135
D6Int137
D6Int42
D6Int10
D6Int142
D6Int143
D6Int145
D6Int43
D6Int146
D6Int46
D6Int47
D6Int56
Irag2
Dnai7
Etfrf1
Kras
Lmntd1
D6Int101
D6Int153

Notes

• Experiment
  Novel SNPs were identified and used to fine map the Pas1 locus. 29 inbred strains were genotyped to isolate Pas1 to a 486 kb region on mouse Chromosome 6. Several of these SNP markers are located within one of the Pas1 candidate genes.
  
  D6Int4, D6Int32a, D6Int32b, D6Int32c, D6Int33, D6Int54, and D6Int8 are located in Lrmp.
  D6Int37a, D6Int38, D6Int84, D6Int40, D6Int95, D6Int96, D6Int41, D6Int101, and D6Int102 are located in Casc1.
  D6Int44, D6Int126, D6Int127, D6Int128, D6Int130, D6Int131, D6Int134, D6Int135, D6Int137, D6Int42, and D6Int10 are located in 4930469P12Rik (Ghiso).
  D6Int142, D6Int143, and D6Int145 are located in Kras.
  D6Int46, D6Int47, D6Int56, and D6Int153 are located in 4933403M22Rik (Lmna-rs1).
  
  The order of the SNP markers is as follows:
  
  centromere - D6Int30 - D6Int4 - D6Int32a - D6Int32b - D6Int32c - D6Int33 - D6Int54 - D6Int8 - D6Int37a - D6Int38 - D6Int84 - D6Int40 - D6Int95 - D6Int96 - D6Int41 - D6Int101 - D6Int102 - D6Int44 - D6Int126 - D6Int127 - D6Int128 - D6Int130 - D6Int131 - D6Int134 - D6Int135 - D6Int137 - D6Int42 - D6Int10 - D6Int142 - D6Int143 - D6Int145 - D6Int43 - D6Int146 - D6Int46 - D6Int47 - D6Int56 - D6Int153 - telomere