Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  15
• Reference
  J:97603 Mates L, et al., Comparative analysis of the mouse and human genes (Matn2 and MATN2) for matrilin-2, a filament-forming protein widely distributed in extracellular matrices. Matrix Biol. 2002 Mar;21(2):163-74
• ID
  MGI:3576109

Genes

Gene	Assay Type	Description
Npr3
Slc1a3
D15Mit10
D15Mit13
Sema5a
Matn2	PCR	pNn/pOr and pNn/pPr
Trhr
Sntb1
Sla
D15Mit3

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6JEi x SPRET/Ei)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  SPRET/EiJ
• Mapping Panel
  JAX (BSS)
• Allele 1
  b from C57BL/6JEiJ
• Allele 2
  s from SPRET/EiJ

CROSS Data

MC #mice	Npr3	Slc1a3	D15Mit10	D15Mit13	Sema5a	Matn2	Trhr	Sntb1	Sla	D15Mit3
42	b	b	b	b	b	b	b	b	b	b
31	s	s	s	s	s	s	s	s	s	s
3	b	b	b	b	s	s	s	s	s	s
1	s	s	s	s	b	b	b	b	b	b
2	b	b	b	b	b	b	s	s	s	s
3	s	s	s	s	s	s	b	b	b	b
2	b	b	b	b	b	b	b	s	s	s
3	s	s	s	s	s	s	s	b	b	b
2	b	b	b	b	b	b	b	b	s	s
3	s	s	s	s	s	s	s	s	b	b
1	b	b	b	b	b	b	b	b	b	s
1	s	s	s	s	s	s	s	s	s	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Npr3	Slc1a3	0	94	0.000	0.000
Slc1a3	D15Mit10	0	94	0.000	0.000
D15Mit10	D15Mit13	0	94	0.000	0.000
D15Mit13	Sema5a	4	94	4.255	2.082
Sema5a	Matn2	0	94	0.000	0.000
Matn2	Trhr	5	94	5.319	2.315
Trhr	Sntb1	5	94	5.319	2.315
Sntb1	Sla	5	94	5.319	2.315
Sla	D15Mit3	2	94	2.128	1.488