Mapping Data

Experiment

• Experiment
  TEXT-QTL
• Chromosome
  2
• Reference
  J:97472 Ackerman KG, et al., Interacting genetic loci cause airway hyperresponsiveness. Physiol Genomics. 2005 Mar 21;21(1):105-11
• ID
  MGI:3576861

Genes

Gene	Assay Type
Bhr1	visible phenotype
D2Mit259	PCR
D2Mit148	PCR

Notes

• Experiment
  Linkage analysis was performed on 123 recombinant congenic animals at the N8 generation to identify QTLs associated with airway hyperresponsiveness (AHR). A recombinant congenic line was created by repeated backcrossing of (C57BL/6J x A/J)F1 animals to C57BL/6J for 7 generations and selecting for the AHR phenotype at each generation. Donor strain A/J exhibits increased naive AHR compared to background strain C57BL/6J. At generation N8 the recombinant congenic line displayed 80% of the donor A/J AHR phenotype. This line retained A/J-derived donor DNA on chromosomes 2 from D2Mit259 - D2Mit148, chromosome 6 from D6Mit86 - D6Mit9, and chromosome 10 from D10Mit95 - D10Mit103.
  
  When analyzed separately the loci on chromosomes 2 and 6 show only a suggestive linkage to AHR. The combined effect of these 2 loci when inherited together show a highly significant linkage to AHR with LOD=5.5, and explains 18.7% of the total variance. It is believed that A/J-derived alleles confer dominantly inherited susceptibility to AHR.
  
  The chromosome 10 locus did not show evidence of linkage to AHR.
  
  The chromosome 2 locus was identified in a previous AHR study as Bhr1 (bronchial hyperresponsiveness 1) peaking at 74 cM. In the current study Bhr1 maps to a 25 cM interval betweenD2Mit259 (80 cM) and D2Mit148 (105 cM).
  
  The chromosome 6 locus was identified in a previous AHR study as Bhr5 (bronchial hyperresponsiveness 5) peaking at 50.5 cM. In the current study Bhr5 maps to a 36.5 cM interval between D6Mit86 (0.5 cM) and D6Mit9(36.5 cM).
  
  2.10.2015 Curator Note: Because Bhr5 was originally mapped in J:33778 using a (C3H/HeJ x A/J)F1 x A/J backcross which differs from the cross used here we have named this QTL, mapping to Chr 6 to a 36.5 cM interval between D6Mit86 (0.5 cM) andD6Mit9 (36.5 cM), Bhr8.