Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  5
• Reference
  J:8645 Jeffreys AJ, et al., Mouse DNA 'fingerprints': analysis of chromosome localization and germ-line stability of hypervariable loci in recombinant inbred strains. Nucleic Acids Res. 1987 Apr 10;15(7):2823-36
• ID
  MGI:38830

Genes

Gene	Assay Type	Description
Pgm2	reported elsewhere
Ms15-6	Southern analysis	probe 33.15
Ms15-5	Southern analysis	probe 33.15
Spp1	reported elsewhere

Notes

• Reference
  RI typing for non minisatellite genes from Lyon and Searle, Genetic Variants and Strains of the Laboratory Mouse, 2nd edition, 1989.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	24	25	27	28	29	30	31	32
Pgm2	D	D	B	B	D	B	D	B	B	B	D	B	D	D	D	D	D	D	B	B	D	B	D	D	D
Ms15-6	B	D	D	B	B	D	B	D	B	D	B	D	B	D	.	B	D	D	B	B	D	D	D	D	.
Ms15-5	.	D	D	.	D	B	D	D	B	B	B	D	.	.	.	D	D	D	B	B	B	D	D	B	D
Spp1	B	D	D	B	B	B	D	D	B	D	B	D	D	B	B	D	D	D	B	B	B	D	D	B	.

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Pgm2	Ms15-6	12	23	60.000	55.100
Ms15-6	Ms15-5	7	19	20.588	13.824
Ms15-5	Spp1	2	19	3.125	2.482