Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:9764 Cheng SV, et al., Synteny on mouse chromosome 5 of homologs for human DNA loci linked to the Huntington disease gene. Genomics. 1989 Apr;4(3):419-26
• ID
  MGI:39101

Genes

Gene	Assay Type	Description
Shh	visible phenotype
Haus3	Southern analysis	HB1.4
Emv1	Southern analysis	pBW50
D5Mnl25e	Southern analysis	pSC25

Notes

• Reference
  D5Mnl25 is called D5SC25 in this reference.

CROSS

• Type
  Backcross, male
• Female Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Male Parent
  <b> <b> <b> <b>/<h> <h> <h> <h>
• Strain
  (C3H/HeJ x B10.D2-H2/nSn-Rr29/+)F1
• Allele 1
  b from B10.D2-H2/nSn
• Allele 2
  h from C3H/HeJ

CROSS Data

MC #mice	Shh	Haus3	Emv1	D5Mnl25e
9	b	b	b	b
20	h	h	h	h
1	b	h	h	h
1	h	b	b	b
3	b	b	b	h
8	h	h	h	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Shh	Haus3	2	42	4.762	3.286
Haus3	Emv1	0	42	0.000	0.000
Emv1	D5Mnl25e	11	42	26.190	6.784