Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  1
• Reference
  J:9802 Schurr E, et al., Linkage analysis of the Bcg gene on mouse chromosome 1. Identification of a tightly linked marker. J Immunol. 1989 Jun 15;142(12):4507-13
• ID
  MGI:39301

Genes

Gene	Allele
Crygf
Fn1
Vil1
Slc11a1	Slc11a1^s
Akp3
Chrng

Notes

• Reference
  Authors use Lsh for locus symbol Nramp. Lsh is an allele of Nramp. Akp3 and Acrg identified in reference as Alpi and Achrg respectively.

RI

• Origin
  C57BL/6J x A/J
• Designation
  BXA
• Abbreviation 1
  B
• Abbreviation 2
  A

RI Data (columns show RI Lines sampled)

Marker	1	2	4	6	7	8	9	10	11	12	13	14	16	17	18	19	22	23	24	25
Crygf	A	B	A	B	A	B	B	A	A	A	A	B	B	A	B	A	A	B	B	B
Fn1	A	B	A	B	A	B	B	A	A	A	A	B	B	A	B	A	A	B	B	B
Slc11a1	.	A	A	B	A	A	A	A	.	A	B	B	B	.	.	A	A	.	.	B
Vil1	A	A	A	B	A	A	A	A	A	A	B	B	B	A	B	A	A	B	B	B
Akp3	A	A	A	B	B	B	B	B	A	A	B	B	B	A	A	A	A	B	B	B
Chrng	A	A	A	B	B	B	B	B	A	A	B	B	B	A	A	A	A	B	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Crygf	Fn1	0	20	0.000	0.000
Fn1	Slc11a1	4	14	12.500	9.244
Slc11a1	Vil1	0	14	0.000	0.000
Vil1	Akp3	5	20	10.000	6.197
Akp3	Chrng	0	20	0.000	0.000