Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  17
• Reference
  J:10135 Vincek V, et al., Linkage map of mouse chromosome 17: localization of 27 new DNA markers. Genomics. 1989 Nov;5(4):773-86
• ID
  MGI:39373

Genes

Gene	Assay Type	Description
D17Leh119I	reported elsewhere	Herrmann, et al., Cell 44:469-476, 1986
D17Leh66E	reported elsewhere	Herrmann, et al., Cell 44:469-476, 1986
D17Tu50	Southern analysis	(lambda)370
Map3k4	reported elsewhere	Mann, et al., Genetics 114:993-1006, 1986
Tcp1	Southern analysis	probe from Dr. K. Willison
D17Leh66D	reported elsewhere	Herrmann, et al., Cell 44:469-476, 1986
D17Tu30	Southern analysis	(lambda)150
D17Leh180	reported elsewhere	Bucan, et al., Genes & Dev 1:376-385, 1987
Hba-ps4	reported elsewhere	Mann, et al., Genetics 114:993-1006, 1986
Glo1	reported elsewhere
D17H21S56	reported elsewhere	Cheng, et al., PNAS 85:6032-6036, 1988
Pim1	reported elsewhere	Nadeau, et al., Immunogenetics 117:533-541, 1987
Cryaa	reported elsewhere	Bucan, et al., Genes & Dev 1:376-385, 1987
H2	reported elsewhere	Bucan, et al., Genes & Dev 1:376-385, 1987
C4b	Southern analysis	probe from Dr. T. Meo and M. Levi-Strauss
D17Leh525	reported elsewhere	Bucan, et al., Genes & Dev 1:376-385, 1987
D17Tu49	Southern analysis	(Lambda)200
Ms15-3	reported elsewhere	Jeffreys, et al., Nuc Acids Res 15:2823-2836, 1987
Crisp2	reported elsewhere
D17Tu16	Southern analysis	cos1-1-1
Pgc	reported elsewhere	Skow, et al., Genetics 110:723-732, 1985
Hprt-ps1	reported elsewhere	Isamat, Som Cell Mol Genet 14:359-369, 1988

Notes

• Reference
  Later papers change D17Tu17, D17Tu8, D17Tu51 to D0Tu7, D0Tu8, D3Tu51 respectively. These markers do not map to Chromosome 17. Revised gene symbols: Glo-1r, Hba-ps4, H2-M1, Cyp21a1 and D17Leh26 (formerly Qglo, Hba-4ps, Mb1, Cyp21 and D17Tu26 respectively). This mapping places Gnat2 on mouse Chromosome 17. It was later determined to map to mouse Chromosome 3. (Wilkie TM, Nat Genet 1:85-91, 1992). This paper maps D17Tu33 to Chromosome 17, it was later determined to be D3Tu33 on Chromosome 3.
  
  Authors used D17Leh119 for D17Leh119I.
• Experiment
  Authors mapped the symbol D17Leh66E. Please note that the probe used for mapping has been shown to hybridize to D17Leh66EI and D17Leh66EII.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30
D17Leh119I	D	D	D	D	B	B	B	D	B	B	B	B	B	B	B	B	D	B	D	B	B	D	B	D
D17Leh66E	D	D	D	D	B	B	B	D	B	B	B	B	B	B	B	B	D	B	D	B	B	D	B	D
D17Tu50	D	B	D	D	B	B	.	D	B	B	B	B	D	B	.	B	D	B	D	B	B	D	B	D
Map3k4	D	B	D	D	B	B	B	D	B	B	B	B	D	B	B	B	D	B	D	B	B	D	B	D
Tcp1	D	B	D	D	B	B	.	D	B	B	B	B	D	B	.	B	D	B	D	B	B	D	B	D
D17Leh66D	D	B	D	D	B	B	B	D	B	B	B	B	D	B	B	B	D	B	D	B	B	D	B	D
D17Tu30	D	B	D	D	B	B	.	D	B	B	B	B	D	B	.	B	D	B	D	D	B	D	B	D
D17Leh180	D	B	D	D	B	B	B	D	B	B	B	B	D	B	B	B	D	B	D	D	B	D	B	D
Hba-ps4	D	B	D	D	B	B	B	D	B	.	B	B	D	B	B	D	D	B	D	D	B	D	B	D
Glo1	D	B	D	D	B	D	D	B	B	B	B	D	D	B	B	D	D	B	D	D	B	D	B	D
D17H21S56	D	B	D	D	B	D	D	B	B	B	B	D	D	B	B	D	D	B	D	D	B	D	B	D
Pim1	D	B	D	D	B	D	D	B	B	B	B	D	D	B	B	D	D	B	D	D	B	D	B	D
Cryaa	D	B	D	D	B	D	D	D	B	B	B	D	D	B	B	D	D	B	D	D	B	D	B	D
H2	D	B	D	D	B	D	D	D	B	B	B	D	D	B	B	D	D	B	D	D	D	D	B	D
C4b	D	B	D	D	B	D	D	D	B	B	B	D	D	B	B	D	D	B	D	D	D	D	B	D
D17Leh525	D	B	D	D	B	D	D	D	B	B	B	D	D	B	B	D	D	B	D	D	D	D	B	D
D17Tu49	D	B	D	D	B	D	.	D	B	B	B	D	D	B	.	D	D	B	D	D	D	D	B	D
Ms15-3	D	B	D	D	B	D	D	B	B	B	B	D	D	B	B	D	D	.	D	D	D	D	B	D
Crisp2	D	B	D	D	B	D	.	B	B	B	B	D	B	B	.	D	D	B	D	D	D	D	B	D
D17Tu16	D	B	D	D	B	D	.	B	B	B	B	D	B	B	.	D	D	B	D	D	D	D	B	D
Pgc	D	D	.	D	B	B	D	B	D	B	B	D	D	B	.	B	B	B	D	D	D	D	B	D
Hprt-ps1	D	B	B	B	B	B	D	B	.	D	B	D	D	B	.	.	D	.	D	B	D	D	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D17Leh119I	D17Leh66E	0	24	0.000	0.000
D17Leh66E	D17Tu50	2	22	2.632	2.054
D17Tu50	Map3k4	0	22	0.000	0.000
Map3k4	Tcp1	0	22	0.000	0.000
Tcp1	D17Leh66D	0	22	0.000	0.000
D17Leh66D	D17Tu30	1	22	1.220	1.279
D17Tu30	D17Leh180	0	22	0.000	0.000
D17Leh180	Hba-ps4	1	23	1.163	1.217
Hba-ps4	Glo1	4	23	5.882	3.617
Glo1	D17H21S56	0	24	0.000	0.000
D17H21S56	Pim1	0	24	0.000	0.000
Pim1	Cryaa	1	24	1.111	1.160
Cryaa	H2	1	24	1.111	1.160
H2	C4b	0	24	0.000	0.000
C4b	D17Leh525	0	24	0.000	0.000
D17Leh525	D17Tu49	0	22	0.000	0.000
D17Tu49	Ms15-3	1	21	1.282	1.347
Ms15-3	Crisp2	1	21	1.282	1.347
Crisp2	D17Tu16	0	22	0.000	0.000
D17Tu16	Pgc	6	21	12.500	7.548
Pgc	Hprt-ps1	5	19	10.870	6.894