Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  17
• Reference
  J:10135 Vincek V, et al., Linkage map of mouse chromosome 17: localization of 27 new DNA markers. Genomics. 1989 Nov;5(4):773-86
• ID
  MGI:39376

Genes

Gene	Assay Type	Description
D17Leh66E	Southern analysis	probe from H. Lehrach
D17Tu50	Southern analysis	(lambda)370
Tcp1	Southern analysis	probe from Dr. K. Willis
D17Tu30	Southern analysis	(lambda)355
D17Tu34	Southern analysis	(lambda)355
Hba-ps4	reported elsewhere	Isamat, Som Cell Mol Genet 14:359-369, 1988
Cryaa	reported elsewhere	Skow, et al., Genetics 110:723-732, 1985
H2	reported elsewhere	Isamat, Som Cell Mol Genet 14:359-369, 1988n
H2-Aa	reported elsewhere	J. Hilgers, personal communication
H2-D1	reported elsewhere
D17Tu42	Southern analysis	(lambda)137
D17Leh26	Southern analysis	(lambda)160
D17Tu24	Southern analysis	(lambda)113
D17Tu49	Southern analysis	(lambda)200
Crisp2	reported elsewhere
D17Tu16	Southern analysis	cos1-1-1
Pgc	reported elsewhere	Isamat, Som Cell Mol Genet 14:359-369, 1988
D17Tu40	Southern analysis	(lambda)99
D17Tu20	Southern analysis	(lambda)56

Notes

• Reference
  Later papers change D17Tu17, D17Tu8, D17Tu51 to D0Tu7, D0Tu8, D3Tu51 respectively. These markers do not map to Chromosome 17. Revised gene symbols: Glo-1r, Hba-ps4, H2-M1, Cyp21a1 and D17Leh26 (formerly Qglo, Hba-4ps, Mb1, Cyp21 and D17Tu26 respectively). This mapping places Gnat2 on mouse Chromosome 17. It was later determined to map to mouse Chromosome 3. (Wilkie TM, Nat Genet 1:85-91, 1992). This paper maps D17Tu33 to Chromosome 17, it was later determined to be D3Tu33 on Chromosome 3.
  
  Authors used D17Leh119 for D17Leh119I.
• Experiment
  RI strains from the Jackson Laboratory (D-K) and J. Hilgers, Vrije Universiteit, The Netherlands (8-13).
  
  Authors mapped the symbol D17Leh66E. Please note that the probe used for mapping has been shown to hybridize to D17Leh66EI and D17Leh66EII.

RI

• Origin
  BALB/cBy x C57BL/6By
• Designation
  CXB
• Abbreviation 1
  C
• Abbreviation 2
  B

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13
D17Leh66E	C	B	C	B	B	B	B	B	B	C	C	C	C
D17Tu50	C	C	C	B	C	B	B	B	B	C	B	C	C
Tcp1	C	B	C	C	B	B	B	B	B	C	B	C	C
D17Tu30	C	C	C	C	B	B	B	B	B	C	B	C	C
D17Tu34	C	B	C	C	B	B	B	B	B	C	B	C	C
Hba-ps4	C	B	C	C	B	B	B	B	B	C	B	C	B
Cryaa	C	B	C	C	B	B	B	B	B	C	B	C	B
H2	C	B	B	C	B	B	B	.	.	.	.	.	.
H2-Aa	.	.	.	.	.	.	.	B	B	C	B	C	B
H2-D1	.	.	.	.	.	.	.	B	C	C	B	C	C
D17Tu42	C	B	B	C	B	B	B	B	C	B	B	C	B
D17Leh26	C	B	B	C	C	B	B	B	C	B	B	C	B
D17Tu24	C	C	B	C	B	B	B	B	C	B	B	C	B
D17Tu49	C	C	B	C	B	B	B	B	C	B	B	C	B
Crisp2	C	C	B	C	B	B	B	B	C	B	B	C	B
D17Tu16	C	C	B	C	B	B	B	B	C	B	B	C	B
Pgc	C	B	B	C	B	B	B	.	.	.	.	.	.
D17Tu40	B	B	B	B	C	B	B	B	C	C	B	C	C
D17Tu20	B	B	B	C	B	C	B	B	C	C	B	C	C

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D17Leh66E	D17Tu50	3	13	8.824	6.833
D17Tu50	Tcp1	3	13	8.824	6.833
Tcp1	D17Tu30	1	13	2.174	2.361
D17Tu30	D17Tu34	1	13	2.174	2.361
D17Tu34	Hba-ps4	1	13	2.174	2.361
Hba-ps4	Cryaa	0	13	0.000	0.000
Cryaa	H2	1	7	4.545	5.356
H2-Aa	H2-D1	2	6	16.667	19.245
H2-D1	D17Tu42	2	6	16.667	19.245
D17Tu42	D17Leh26	1	13	2.174	2.361
D17Leh26	D17Tu24	2	13	5.000	4.228
D17Tu24	D17Tu49	0	13	0.000	0.000
D17Tu49	Crisp2	0	13	0.000	0.000
Crisp2	D17Tu16	0	13	0.000	0.000
D17Tu16	Pgc	1	7	4.545	5.356
Pgc	D17Tu40	3	7	30.000	36.661
D17Tu40	D17Tu20	3	13	8.824	6.833