Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  12
• Reference
  J:9617 Blank RD, et al., A linkage map of mouse chromosome 12: localization of Igh and effects of sex and interference on recombination. Genetics. 1988 Dec;120(4):1073-83
• ID
  MGI:39533

Genes

Gene	Assay Type	Description
D12Nyu2	Southern analysis	M13(phi)19-25
D12Nyu1	Southern analysis	M13(phi)7-97
D12Nyu3	Southern analysis	M13p19-25
Fos	Southern analysis	pfos1
D12Nyu4	Southern analysis	M13(phi)26-15
Mtv9	Southern analysis	pMtv9-5'c
Serpina1	Southern analysis	pG3.5
Igha	Southern analysis	p3'(alpha)

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, male
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x SWR/J)F1
• Allele 1
  b from C57BL/6J
• Allele 2
  s from SWR/J

CROSS Data

MC #mice	D12Nyu2	D12Nyu1	D12Nyu3	Fos	D12Nyu4	Mtv9	Serpina1	Igha
13	b	b	b	b	b	b	b	b
17	s	s	s	s	s	s	s	s
2	b	s	s	s	s	s	s	s
2	s	b	b	b	b	b	b	b
0	b	b	s	s	s	s	s	s
0	s	s	b	b	b	b	b	b
3	b	b	b	s	s	s	s	s
4	s	s	s	b	b	b	b	b
0	b	b	b	b	s	s	s	s
0	s	s	s	s	b	b	b	b
0	b	b	b	b	b	s	s	s
0	s	s	s	s	s	b	b	b
3	b	b	b	b	b	b	s	s
1	s	s	s	s	s	s	b	b
4	b	b	b	b	b	b	b	s
3	s	s	s	s	s	s	s	b
0	b	s	b	b	b	b	b	b
0	s	b	s	s	s	s	s	s
0	b	s	s	s	s	b	b	b
0	s	b	b	b	b	s	s	s
0	b	s	s	s	s	s	s	b
0	s	b	b	b	b	b	b	s
0	b	b	b	s	s	s	s	b
0	s	s	s	b	b	b	b	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D12Nyu2	D12Nyu1	4	52	7.692	3.695
D12Nyu1	D12Nyu3	0	52	0.000	0.000
D12Nyu3	Fos	7	52	13.462	4.733
Fos	D12Nyu4	0	52	0.000	0.000
D12Nyu4	Mtv9	0	52	0.000	0.000
Mtv9	Serpina1	4	52	7.692	3.695
Serpina1	Igha	7	52	13.462	4.733