Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  16
• Reference
  J:11584 Irving NG, et al., Mouse chromosome-specific markers generated by PCR and their mapping through interspecific backcrosses. Genomics. 1991 Nov;11(3):679-86
• ID
  MGI:39655

Genes

Gene	Assay Type	Description
Prm1	reported elsewhere
Igl-1	reported elsewhere
Sst	Southern analysis	p1-16-13
D16Nds2	PCR amplified length variant	TJ-2.133
Gap43	reported elsewhere
D16Smh6	reported elsewhere
D16Smh250	PCR amplified length variant	L1 repeat element
D16H21S16	reported elsewhere
App	reported elsewhere
Pgk1-ps1	reported elsewhere
Sod1	reported elsewhere
Ets2	reported elsewhere
Mx1	reported elsewhere

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/10 x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/10
• Allele 1
  b from C57BL/10
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Prm1	Igl-1	Sst	D16Nds2	Gap43	D16Smh6	D16Smh250	D16H21S16	App	Pgk1-ps1	Sod1	Ets2	Mx1
12	b	b	b	b	b	b	b	b	b	b	b	b	b
13	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	b	b	b	b	b	b	b	b	b	b	b	b
5	b	b	b	s	s	s	s	s	s	s	s	s	s
1	s	s	s	b	b	b	b	b	b	b	b	b	b
2	b	b	b	b	s	s	s	s	s	s	s	s	s
1	s	s	s	s	b	b	b	b	b	b	b	b	b
1	s	s	s	s	s	b	b	b	b	b	b	b	b
3	s	s	s	s	s	s	s	b	b	b	b	b	b
2	b	b	b	b	b	b	b	s	s	s	s	s	s
1	s	s	s	s	s	s	b	b	b	b	b	s	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Prm1	Igl-1	1	42	2.381	2.352
Igl-1	Sst	0	42	0.000	0.000
Sst	D16Nds2	6	42	14.286	5.399
D16Nds2	Gap43	3	42	7.143	3.974
Gap43	D16Smh6	1	42	2.381	2.352
D16Smh6	D16Smh250	1	42	2.381	2.352
D16Smh250	D16H21S16	5	42	11.905	4.997
D16H21S16	App	0	42	0.000	0.000
App	Pgk1-ps1	0	42	0.000	0.000
Pgk1-ps1	Sod1	0	42	0.000	0.000
Sod1	Ets2	1	42	2.381	2.352
Ets2	Mx1	0	42	0.000	0.000