Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  7
• Reference
  J:10993 Saunders AM, et al., A molecular genetic linkage map of mouse chromosome 7. Genomics. 1990 Nov;8(3):525-35
• ID
  MGI:40068

Genes

Gene	Assay Type	Description
Prkcg	Southern analysis	phPKC-(gamma)6
Apoe	Southern analysis	p2CL
Atp1a3	Southern analysis	pA1
Ckm	Southern analysis	pJN2CK-M
D7H19S19	Southern analysis	p17.4-4(2)
Ercc2	Southern analysis	pKER2
Xrcc1	Southern analysis	XP1-30
Pou2f2	Southern analysis	Puc-3-1
Cyp2a	Southern analysis	P450-IIA3
Cyp2b	Southern analysis	pP-450b-5
Rip	Southern analysis	pf3
Tgfb1	Southern analysis	pMUR(beta)2
D7H19F11S1	Southern analysis	OL5
Gpi1	Southern analysis	HS-10
Mag	Southern analysis	5Mag
Nudt19	Southern analysis	pMK908
Cebpa	Southern analysis	CephI
Klk1b9	Southern analysis	MB2-12A
Klk1	Southern analysis	pMK-1
Lhb	Southern analysis	(beta)LH
Klk1b3	Southern analysis	pSM676
Snrnp70	Southern analysis	FL70K
Rras	Southern analysis	MR-9
Myod1	Southern analysis	Myo D1 cDNA
Snrp2a	Southern analysis	A'910
Hras	Southern analysis	HB-11
Igf1r	Southern analysis	pIGF-1-R.8
Fes	Southern analysis	p80
Tyr	Southern analysis	MTY811C
Emv23	Southern analysis	pEmv-23
D7Was12	Southern analysis	clone 12A
Calca	Southern analysis	rat CT-89
Pth	Southern analysis	rPTHs-1
Hbb	Southern analysis	pBR:(beta)
H19	Southern analysis	H19RS
Th	Southern analysis	pHGTH4
Fvis1	Southern analysis	p1.8

Notes

• Reference
  This paper follows the Rip locus using a probe identifying Cyp2b10. Revised gene symbols: Atp1a3, Tgfb1, Snrp70, Snrp2a, Emv23, D7H19S19 and D7H19F11S1 (formerly Atpa-2, Tgfb, Rnu1p70, Rnu2pa, C58v-4, D19S19h and D19F11S1 respectively). Authors use Pkcg for Pkcc.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Prkcg	Apoe	Atp1a3	Ckm	D7H19S19	Ercc2	Xrcc1	Pou2f2	Cyp2a	Rip	Tgfb1	D7H19F11S1	Gpi1	Mag	Nudt19	Cebpa	Klk1b9	Klk1	Lhb	Klk1b3	Snrnp70	Rras	Myod1	Snrp2a	Hras	Igf1r	Fes	Tyr	Emv23	D7Was12	Calca	Pth	Hbb	H19	Th	Fvis1
25	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
26	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
6	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s
5	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s
3	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c
5	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s
2	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c
3	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c
3	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s
3	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c
7	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s
1	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s
1	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s
2	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s	s	s	s	s	c	c	c
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c	c	c	c	s	s	s
1	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s	s	c	c	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Prkcg	Apoe	3	113	2.655	1.512
Apoe	Atp1a3	0	113	0.000	0.000
Atp1a3	Ckm	0	113	0.000	0.000
Ckm	D7H19S19	0	113	0.000	0.000
D7H19S19	Ercc2	0	113	0.000	0.000
Ercc2	Xrcc1	0	113	0.000	0.000
Xrcc1	Pou2f2	0	113	0.000	0.000
Pou2f2	Cyp2a	1	113	0.885	0.881
Rip	Tgfb1	0	113	0.000	0.000
Tgfb1	D7H19F11S1	2	113	1.770	1.240
D7H19F11S1	Gpi1	2	113	1.770	1.240
Gpi1	Mag	0	113	0.000	0.000
Mag	Nudt19	1	113	0.885	0.881
Nudt19	Cebpa	0	113	0.000	0.000
Cebpa	Klk1b9	12	113	10.619	2.898
Klk1b9	Klk1	0	113	0.000	0.000
Klk1	Lhb	0	113	0.000	0.000
Lhb	Klk1b3	0	113	0.000	0.000
Klk1b3	Snrnp70	0	113	0.000	0.000
Snrnp70	Rras	0	113	0.000	0.000
Rras	Myod1	1	113	0.885	0.881
Myod1	Snrp2a	10	113	8.850	2.672
Snrp2a	Hras	3	113	2.655	1.512
Hras	Igf1r	0	113	0.000	0.000
Igf1r	Fes	7	113	6.195	2.268
Fes	Tyr	5	113	4.425	1.935
Tyr	Emv23	1	113	0.885	0.881
Emv23	D7Was12	1	113	0.885	0.881
D7Was12	Calca	7	113	6.195	2.268
Calca	Pth	1	113	0.885	0.881
Pth	Hbb	1	113	0.885	0.881
Hbb	H19	16	113	14.159	3.280
H19	Th	1	113	0.885	0.881
Th	Fvis1	1	113	0.885	0.881