Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  3
• Reference
  J:10478 Kingsmore SF, et al., Long-range restriction site mapping of a syntenic segment conserved between human chromosome 1 and mouse chromosome 3. Genomics. 1990 May;7(1):75-83
• ID
  MGI:40152

Genes

Gene	Assay Type	Description
S100a6	Southern analysis	hp2A9
Cd2	Southern analysis	MT11.4
Atp1a1	Southern analysis	z4A
Ngf	Southern analysis	pmngf6
Tshb	Southern analysis	pTSHb
Ampd1	Southern analysis	rat Ampd-1 cDNA
Amy2a5	Southern analysis	probe 3

Notes

• Reference
  Revised gene symbol: Cd2 (formerly Ly-37).
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	S100a6	Cd2	Atp1a1	Ngf	Tshb	Ampd1	Amy2a5
153	c	c	c	c	c	c	c
165	s	s	s	s	s	s	s
8	c	s	s	s	s	s	s
4	s	c	c	c	c	c	c
1	c	c	s	s	s	s	s
2	s	s	c	c	c	c	c
0	c	c	c	s	s	s	s
1	s	s	s	c	c	c	c
0	c	c	c	c	s	s	s
0	s	s	s	s	c	c	c
0	c	c	c	c	c	s	s
0	s	s	s	s	s	c	c
3	c	c	c	c	c	c	s
1	s	s	s	s	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
S100a6	Cd2	12	338	3.550	1.007
Cd2	Atp1a1	3	338	0.888	0.510
Atp1a1	Ngf	1	338	0.296	0.295
Ngf	Tshb	0	338	0.000	0.000
Tshb	Ampd1	0	338	0.000	0.000
Ampd1	Amy2a5	4	338	1.183	0.588