Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:10990 Schurr E, et al., Mapping of Col3a1 and Col6a3 to proximal murine chromosome 1 identifies conserved linkage of structural protein genes between murine chromosome 1 and human chromosome 2q. Genomics. 1990 Nov;8(3):477-86
• ID
  MGI:40209

Genes

Gene	Assay Type	Description
Col3a1	Southern analysis	SD-1
Crygf	Southern analysis	pUC(gamma)2.1
Fn1	Southern analysis	BXB32.5
Vil1	Southern analysis	pEX2
Chrng	Southern analysis	Acrg cDNA
Col6a3	Southern analysis	p-24
Ren1	Southern analysis	pDBA-Rn8
Ren2	Southern analysis	pDBA-Rn8

Notes

• Reference
  Gene symbols Col3a-1 and Col6a-3 listed in reference as Col3a1 and Col6a3 respectively. This article reports a multipoint backcross typed for all loci and additional mice typed for only some of the loci. These additional mice appear as 2-point data.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Col3a1	Crygf	Fn1	Vil1	Chrng	Col6a3	Ren1	Ren2
42	b	b	b	b	b	b	b	b
24	s	s	s	s	s	s	s	s
7	b	s	s	s	s	s	s	s
6	s	b	b	b	b	b	b	b
2	b	b	s	s	s	s	s	s
1	s	s	b	b	b	b	b	b
2	b	b	b	s	s	s	s	s
2	s	s	s	b	b	b	b	b
8	b	b	b	b	s	s	s	s
7	s	s	s	s	b	b	b	b
1	b	b	b	b	b	s	s	s
1	s	s	s	s	s	b	b	b
11	b	b	b	b	b	b	s	s
8	s	s	s	s	s	s	b	b
1	s	b	s	s	s	s	s	s
1	b	s	b	b	b	b	b	b
1	s	b	b	b	b	b	s	s
1	b	b	b	b	s	s	b	b

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Col3a1	Crygf	1	4
Crygf	Fn1	3	59
Fn1	Vil1	2	116
Vil1	Chrng	16	97
Chrng	Col6a3	2	64
Col6a3	Ren1	12	50
Col6a3	Ren2	12	50

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Col3a1	Crygf	17	131	12.977	2.936
Crygf	Fn1	8	188	4.255	1.472
Fn1	Vil1	6	244	2.459	0.991
Vil1	Chrng	32	239	13.389	2.203
Chrng	Col6a3	4	192	2.083	1.031
Col6a3	Ren1	33	188	17.553	2.775
Ren1	Ren2	0	126	0.000	0.000