Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  1
• Reference
  J:1579 Woodward SR, et al., Random sequence oligonucleotide primers detect polymorphic DNA products which segregate in inbred strains of mice. Mamm Genome. 1992;3(2):73-8
• ID
  MGI:40929

Genes

Gene	Assay Type	Description
D1Byu1	PCR amplified length variant	R15
D1Byu2	PCR amplified length variant	E5
D1Byu3	PCR amplified length variant	H9
D1Byu4	PCR amplified length variant	M18
D1Byu5	PCR amplified length variant	R11
D1Byu6	PCR amplified length variant	R15
D1Byu7	PCR amplified length variant	V8
D1Byu8	PCR amplified length variant	U1
D1Byu9	PCR amplified length variant	Y7
D1Byu25	PCR amplified length variant	D18
D1Byu26	PCR amplified length variant	X13

Notes

• Reference
  The primer designators are according to Operon Technologies, Inc. Chromosome assignments were based on MAPMAKER assisted analysis of the strain distribution patterns compared with those provided by B.A. Taylor (The Jackson Laboratory) for BXD RI strains.Authors use D0Byu25, D0Byu26, D0Byu21, D0Byu27 and D0Byu10 for locus symbols D1Byu25, D1Byu26, D15Byu21, D7Byu27 and D13Byu5 respectively.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
D1Byu1	B	B	B	D	D	B	B	B	B	B	D	B	B	D	B	B	D	B	B	D	D	D	D	D	B	D
D1Byu2	B	B	D	D	B	B	D	B	D	B	D	B	B	B	D	B	B	D	D	B	D	D	D	D	B	D
D1Byu3	B	D	D	B	D	D	D	B	B	B	B	B	B	B	B	B	D	B	D	D	D	B	B	D	B	D
D1Byu4	B	B	D	B	B	D	D	B	D	B	B	D	D	B	B	B	D	D	D	D	D	D	D	D	B	D
D1Byu5	B	B	D	B	B	D	D	B	D	B	B	B	B	B	B	B	D	D	D	D	D	D	D	D	B	D
D1Byu6	B	B	D	B	B	D	D	B	D	B	B	B	B	B	B	B	D	D	D	D	D	D	D	D	B	D
D1Byu7	B	B	D	B	B	D	D	B	D	B	B	B	B	B	B	B	D	D	.	D	D	.	D	D	B	B
D1Byu8	B	D	D	D	D	D	D	B	B	B	B	B	B	B	B	B	D	B	D	D	D	B	B	D	B	D
D1Byu9	B	B	D	D	D	D	B	B	D	D	D	B	B	B	B	D	D	D	D	B	D	B	D	B	B	D
D1Byu25	D	B	B	D	D	B	B	D	B	B	D	D	D	D	D	D	B	B	B	D	B	D	D	D	B	B
D1Byu26	B	B	D	D	B	B	B	B	B	B	D	B	D	B	D	B	B	D	D	B	D	D	D	D	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Byu1	D1Byu2	10	26	22.727	13.326
D1Byu2	D1Byu3	12	26	37.500	25.817
D1Byu3	D1Byu4	8	26	14.286	7.805
D1Byu4	D1Byu5	2	26	2.174	1.670
D1Byu5	D1Byu6	0	26	0.000	0.000
D1Byu6	D1Byu7	1	24	1.111	1.160
D1Byu7	D1Byu8	7	24	12.963	7.331
D1Byu8	D1Byu9	10	26	22.727	13.326
D1Byu9	D1Byu25	18	26	-450.000	1529.706
D1Byu25	D1Byu26	12	26	37.500	25.817