Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  4
• Reference
  J:3011 Birkenmeier EH, et al., Fingerprinting genomes by use of PCR with primers that encode protein motifs or contain sequences that regulate gene expression [published erratum appears in Mamm Genome 1993;4(2):133]. Mamm Genome. 1992;3(10):537-45
• ID
  MGI:40988

Genes

Gene	Assay Type	Description
D4Bir1	PCR amplified length variant	primer 24, primer 25
D4Bir2	PCR amplified length variant	primer 24, primer 25
D4Bir3	PCR amplified length variant	primer 24, primer 25
D4Bir4	PCR amplified length variant	primer 24, primer 25
D4Bir5	PCR amplified length variant	primer 24, primer 25

Notes

• Experiment
  Linkage was detected between D4Bir1 and D4Smh6b (2/25), D4Bir1 and Te14q (2/25), D4Bir1 and Sac (0/21), D4Bir2 and Pmv30 (0/26), D4Bir3 and Mos (4/26), D4Bir3 and Mtv14 (3/26), D4Bir4 and Mtv14 (2/26), D4Bir5 and Ifa (1/26) and D4Bir5 and b (2/26). Numbers in parenthesis indicate number of recombinants over number of informative RI strains analyzed. Typing of D4Bir3 in BXD-32 was corrected to D by a published erratum (Birkenmeier 1993; Mammalian Genome 4:133).

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
D4Bir1	D	D	B	B	D	D	B	D	D	D	B	D	D	B	B	D	D	B	B	B	D	D	B	D	B	D
D4Bir2	D	B	B	B	B	B	B	B	D	B	B	B	B	D	B	D	D	B	D	D	B	B	B	D	B	B
D4Bir3	B	B	B	B	B	B	D	B	D	B	D	B	D	D	B	B	D	B	D	D	D	B	B	D	B	D
D4Bir4	D	D	B	D	B	B	D	B	D	B	B	B	B	D	B	B	D	B	D	D	D	B	B	D	B	D
D4Bir5	D	B	B	B	B	D	B	B	D	B	D	B	B	D	B	D	D	B	D	D	D	D	B	D	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D4Bir1	D4Bir2	13	26	50.000	39.223
D4Bir2	D4Bir3	7	26	11.290	6.119
D4Bir3	D4Bir4	5	26	6.757	3.817
D4Bir4	D4Bir5	8	26	14.286	7.805