Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  4
• Reference
  J:2643 Beier DR, et al., Mapping genes in the mouse using single-strand conformation polymorphism analysis of recombinant inbred strains and interspecific crosses. Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):9102-6
• ID
  MGI:41060

Genes

Gene	Assay Type	Description
Tyrp1	PCR amplified length variant	DB45, DB46
Plin2	PCR amplified length variant	Dend154, Dend152
Ifna	PCR amplified length variant	DB47, DB48
Lck	PCR amplified length variant	DB43, DB44
Dvl1	PCR amplified length variant	primer Dsh4A, Dsh4B

Notes

• Reference
  Authors use Trp-1 for Tyrp.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
Tyrp1	D	B	B	B	B	D	B	B	D	B	D	B	B	B	B	D	B	B	D	D	D	D	B	D	B	B
Plin2	D	B	B	B	.	D	B	B	D	.	D	B	B	D	B	D	D	B	D	D	D	D	B	D	B	B
Ifna	D	B	B	B	B	D	B	D	D	B	D	B	B	D	B	D	D	B	D	D	D	D	B	D	B	B
Lck	D	B	B	B	D	D	B	D	D	D	.	D	D	B	B	D	B	D	B	D	B	D	B	D	B	D
Dvl1	D	D	B	B	D	D	B	D	D	D	B	D	D	B	B	D	D	B	B	B	D	D	B	D	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Tyrp1	Plin2	2	24	2.381	1.842
Plin2	Ifna	1	24	1.111	1.160
Ifna	Lck	10	25	25.000	15.309
Lck	Dvl1	5	25	7.143	4.082