Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:2183 Vidal SM, et al., Identification and mapping of six microdissected genomic DNA probes to the proximal region of mouse chromosome 1. Genomics. 1992 Sep;14(1):32-7
• ID
  MGI:41072

Genes

Gene	Assay Type	Description
D1Mcg162	Southern analysis	(lambda)Mm1C-162
Col3a1	reported elsewhere
Crygf	reported elsewhere
D1Mcg163	Southern analysis	(lambda)Mm1C-163
Fn1	reported elsewhere
Tnp1	reported elsewhere
D1Mcg165	Southern analysis	(lambda)Mm1C-165
Vil1	reported elsewhere
Inha	reported elsewhere
D1Mcg153	Southern analysis	(lambda)Mm1c-153
D1Mcg156	Southern analysis	(lambda)Mm1C-156
Pax3	reported elsewhere
Akp3	reported elsewhere
Chrng	reported elsewhere
Col6a3	reported elsewhere
Sag	reported elsewhere
D1Mcg150	Southern analysis	(lambda)Mm1C-150
Ren1	reported elsewhere
Ren2	reported elsewhere

Notes

• Reference
  For loci D1Mcg162, D1Mcg163, D1Mcg165, D1Mcg153, D1Mcg156, D1Mcg150 authors use (lambda)Mm1C-162, (lambda)Mm1C-163, (lambda)Mm1C-165, (lambda)Mm1C-153, (lambda)Mm1C-156 and (lambda)Mm1C-150 respectively.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	D1Mcg162	Col3a1	Crygf	D1Mcg163	Fn1	Tnp1	D1Mcg165	Vil1	Inha	D1Mcg153	D1Mcg156	Pax3	Akp3	Chrng	Col6a3	Sag	D1Mcg150	Ren1	Ren2
23	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
35	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
6	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
3	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
5	s	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
4	b	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	b	b	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	b	b	b	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
2	s	s	s	s	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b
0	b	b	b	b	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	b	b	b	b	b	b	b	b	b	b	b	b	b
1	b	b	b	b	b	b	s	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	b	b	b	b	b	b	b	b	b	b	b
1	b	b	b	b	b	b	b	b	s	s	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	b	b	b	b	b	b	b	b	b	b
2	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s	s	s	s	s
2	s	s	s	s	s	s	s	s	s	s	b	b	b	b	b	b	b	b	b
2	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	b	b	b	b	b	b	b	b
0	b	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s	s	s
3	s	s	s	s	s	s	s	s	s	s	s	s	b	b	b	b	b	b	b
2	b	b	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	s	s	s	s	b	b	b	b	b	b
1	b	b	b	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	b	b	b	b	b
1	b	b	b	b	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	b	b	b
2	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	s	s	s
10	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	b	b
8	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	s	s
1	s	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
1	b	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
1	s	s	b	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
2	s	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	s	s
1	b	b	b	b	b	b	b	b	b	b	b	s	s	s	s	s	s	b	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mcg162	Col3a1	13	125	10.400	2.730
Col3a1	Crygf	12	125	9.600	2.635
Crygf	D1Mcg163	2	125	1.600	1.122
D1Mcg163	Fn1	2	125	1.600	1.122
Fn1	Tnp1	2	125	1.600	1.122
Tnp1	D1Mcg165	1	125	0.800	0.797
D1Mcg165	Vil1	0	125	0.000	0.000
Vil1	Inha	1	125	0.800	0.797
Inha	D1Mcg153	3	125	2.400	1.369
D1Mcg153	D1Mcg156	4	125	3.200	1.574
D1Mcg156	Pax3	2	125	1.600	1.122
Pax3	Akp3	5	125	4.000	1.753
Akp3	Chrng	1	125	0.800	0.797
Chrng	Col6a3	2	125	1.600	1.122
Col6a3	Sag	0	125	0.000	0.000
Sag	D1Mcg150	2	125	1.600	1.122
D1Mcg150	Ren1	21	125	16.800	3.344
Ren1	Ren2	0	125	0.000	0.000