Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  3
• Reference
  J:1066 Dietrich W, et al., A genetic map of the mouse suitable for typing intraspecific crosses. Genetics. 1992 Jun;131(2):423-47
• ID
  MGI:41103

Genes

Gene	Assay Type	Description
D3Mit5	PCR amplified length variant	M123
D3Mit9	PCR amplified length variant	A85
D3Mit10	PCR amplified length variant	A34
D3Mit12	PCR amplified length variant	A60
D3Mit15	PCR amplified length variant	A55
D3Mit17	PCR amplified length variant	M235
D3Mit19	PCR amplified length variant	141
D3Mit21	PCR amplified length variant	D31
D3Mit22	PCR amplified length variant	D122
D3Nds2	PCR amplified length variant	T21

Notes

• Experiment
  For D3Mit12, BXD-16 carries a mutant allele differing from both B and D.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
D3Mit5	.	D	B	B	D	D	D	D	B	D	B	B	D	D	B	D	B	B	B	B	D	D	B	.	.	.
D3Mit9	.	B	D	B	B	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	.	.	.
D3Mit10	.	B	B	B	D	B	D	B	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	.	.	.
D3Mit12	.	D	B	B	D	B	D	B	B	B	D	.	B	B	B	D	D	B	B	D	B	D	B	.	.	.
D3Mit15	.	D	B	B	D	B	D	D	D	B	B	B	D	D	D	D	B	D	B	D	B	D	B	.	.	.
D3Mit17	.	B	B	D	D	D	D	B	D	B	B	B	D	D	D	D	B	B	B	D	B	D	B	.	.	.
D3Mit19	.	D	B	D	B	B	D	D	D	B	D	B	D	B	D	B	D	B	B	D	B	D	B	.	.	.
D3Mit21	.	D	B	B	D	B	D	D	D	D	D	B	D	D	B	D	B	B	B	B	D	D	B	.	.	.
D3Mit22	.	B	D	B	B	B	D	D	B	B	D	B	B	B	B	D	D	B	B	D	B	D	B	.	.	.
D3Nds2	.	D	B	B	D	B	D	D	D	B	B	B	D	D	D	D	B	D	B	D	B	D	B	.	.	.

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D3Mit5	D3Mit9	12	22	75.000	80.283
D3Mit9	D3Mit10	2	22	2.632	2.054
D3Mit10	D3Mit12	1	21	1.282	1.347
D3Mit12	D3Mit15	8	21	22.222	14.424
D3Mit15	D3Mit17	5	22	8.621	5.142
D3Mit17	D3Mit19	8	22	20.000	12.410
D3Mit19	D3Mit21	9	22	26.471	17.555
D3Mit21	D3Mit22	10	22	35.714	26.215
D3Mit22	D3Nds2	10	22	35.714	26.215