Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  13
• Reference
  J:3879 Lueders KK, et al., Genomic mapping of intracisternal A-particle proviral elements. Mamm Genome. 1993;4(2):69-77
• ID
  MGI:41463

Genes

Gene	Assay Type	Description
Iapls1-13	Southern analysis	LS1
Iapls1-1	Southern analysis	LS1
Iapls2-6	Southern analysis	LS2
Iapls3-14	Southern analysis	LS3
Pmv9	reported elsewhere	Frankel, et al., J Virol 63:3810-3821, 1989b
Iapls1-8	Southern analysis	LS1
Tel13q	reported elsewhere	Elliott, et al., Mamm Genome 1:118-122, 1991

Notes

• Reference
  Revised gene symbols: D0Tu7, Cd72 and Tel13q (formerly D17Tu7, Lyb-2 and TB-3 respectively).
• Experiment
  Linkage was detected between Iapls1-13 and Il-9 (0/22), Iapls1-1 and Pmv-41 (1/26), Iapls1-1 and Xmv-13 (2/26), Iapls2-6 and D13Mit11 (3/22), Iapls2-6 and Pmv-9 (1/25), Iapls3-14 and Pmv-9 (0/25), Iapls1-8 and D13Byu10 (5/26), and Iapls1-8 and Tel13q (6/26). Numbers in parenthesis equal number of recombinants over number of informative RI strains analyzed.

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
Iapls1-13	B	D	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	B	D	D	D	D	B	D	D	D
Iapls1-1	D	D	B	D	B	D	D	D	D	D	B	D	B	B	D	D	B	D	D	D	D	D	B	D	D	D
Iapls2-6	D	D	B	D	B	D	D	D	D	D	B	D	B	D	D	D	B	D	D	B	D	D	B	B	D	D
Iapls3-14	D	D	B	D	B	D	D	D	D	D	B	D	B	D	D	D	D	D	D	B	D	D	B	B	D	D
Pmv9	D	D	B	D	B	D	D	D	D	D	B	D	B	.	D	D	D	D	D	B	D	D	B	B	D	D
Iapls1-8	B	B	D	D	B	D	D	B	B	B	B	D	B	B	D	B	D	D	D	B	D	D	B	B	D	D
Tel13q	D	B	D	D	D	D	D	D	B	B	B	D	D	B	D	B	D	D	D	B	B	B	B	B	D	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Iapls1-13	Iapls1-1	3	26	3.488	2.291
Iapls1-1	Iapls2-6	3	26	3.488	2.291
Iapls2-6	Iapls3-14	1	26	1.020	1.062
Iapls3-14	Pmv9	0	25	0.000	0.000
Pmv9	Iapls1-8	7	25	12.069	6.674
Iapls1-8	Tel13q	6	26	8.824	4.832