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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:12628 Koseki H, et al., Fine genetic mapping of the proximal part of mouse chromosome 2 excludes Pax-8 as a candidate gene for Danforth's short tail (Sd). Mamm Genome. 1993;4(6):324-7
  • ID
    MGI:42142
Genes
GeneAlleleAssay TypeDescription
D2Mit1 PCR amplified length variant M128
D2Mit2 PCR amplified length variant M112
D2Mit3 PCR amplified length variant M116
D2Mit4 PCR amplified length variant M52
Vim Southern analysis
Etl4 Southern analysis
Pax8 Southern analysis
D2Mit14a PCR amplified length variant M163
Mdk Southern analysis
Notes
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x SEG)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from SEG
CROSS Data
MC #mice D2Mit1 D2Mit2 D2Mit3 D2Mit4 Vim Etl4 Pax8 D2Mit14a Mdk
11 b b b b b b b b b
10 s s s s s s s s s
1 b s s s s s s s s
2 s s s b b b b b b
1 b b b b s s s s s
2 b b b b b s s s s
1 b b b b b b s s s
1 b b b b b b b b s
2 s s s s s s s s b
1 . . . . s . . . s
4 b b b . b b . . b
3 b b b . b . . . s
1 s s s . s . . . b
1 b b b . s . . . s
2 . . . . b . . . s
1 b b b . b . . . b
1 s s s . s s . . b
2 . . . . b . . . b
5 s . . . s s . . s
2 s s . . s s . . s
1 s s . . s s . . b
1 s s s s s s . b b
1 s . . . s s b b b
1 s s s . s s s s s
1 s . s s s s . s s
1 s . . . s b b b b
1 b b b . b b . b b
2 s . . . s s s s s
1 s . . . s s . b b
1 b b b b b b . . b
1 s . . . s b . . b
2 b b . . b b . . b
1 b b . . b b . . s
1 s s . . b b b b b
1 s . . . s s . s s
1 s . . . s s s s b
1 b b b b b b s . s
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D2Mit1 D2Mit2 1 54 1.852 1.835
D2Mit2 D2Mit3 0 47 0.000 0.000
D2Mit3 D2Mit4 2 35 5.714 3.923
D2Mit4 Vim 1 35 2.857 2.816
Vim Etl4 4 62 6.452 3.120
Etl4 Pax8 3 39 7.692 4.267
Pax8 D2Mit14a 0 38 0.000 0.000
D2Mit14a Mdk 4 43 9.302 4.430

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory