Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:13215 Ma Q, et al., Analysis of the murine All-1 gene reveals conserved domains with human ALL-1 and identifies a motif shared with DNA methyltransferases. Proc Natl Acad Sci U S A. 1993 Jul 1;90(13):6350-4
• ID
  MGI:42461

Genes

Gene	Allele	Assay Type	Description
Odc-rs14		Southern analysis	pCR6
Tpi-rs4		Southern analysis	pHTPI-5A
D9Mit2		PCR amplified length variant	L32
Kmt2a		Southern analysis	cos20
Cd3d		PCR amplified length variant	Cd3d-pA, Cd3d-pB
Myo5a	Myo5a^d	Southern analysis	D46

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <a> <a> <a> <a> <a> <a>/<s> <s> <s> <s> <s> <s>
• Strain
  (AEJ/Gn x M. spretus)F1
• Male Parent
  <a> <a> <a> <a> <a> <a/<a> <a> <a> <a> <a> <a>
• Strain
  AEJ/Gn
• Allele 1
  a from AEJ/Gn
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Odc-rs14	Tpi-rs4	D9Mit2	Kmt2a	Cd3d	Myo5a
25	a	a	a	a	a	a
29	s	s	s	s	s	s
4	s	a	a	a	a	a
2	a	s	s	s	s	s
2	s	s	a	a	a	a
2	a	a	s	s	s	s
2	s	s	s	a	a	a
2	a	a	a	s	s	s
10	s	s	s	s	s	a
3	a	a	a	a	a	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Odc-rs14	Tpi-rs4	4	61
Tpi-rs4	D9Mit2	0	6
D9Mit2	Kmt2a	1	25
Cd3d	Myo5a	3	22

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Odc-rs14	Tpi-rs4	10	146	6.849	2.090
Tpi-rs4	D9Mit2	4	87	4.598	2.245
D9Mit2	Kmt2a	5	107	4.673	2.040
Kmt2a	Cd3d	0	81	0.000	0.000
Cd3d	Myo5a	16	106	15.094	3.477