Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:14573 Warman ML, et al., Physical and linkage mapping of the human and murine genes for the alpha 1 chain of type IX collagen (COL9A1). Genomics. 1993 Sep;17(3):694-8
• ID
  MGI:42492

Genes

Gene	Assay Type	Description
Col9a1	Southern analysis	pYMm128
Col3a1	Southern analysis	pF-C
Gls	Southern analysis	pGA1

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c>/<s> <s> <s>
• Strain
  (C3H/HeJ-Fasl x M. spretus)F1
• Male Parent
  <c> <c> <c>/<c> <c> <c>
• Strain
  C3H/HeJ-Fasl/J
• Mapping Panel
  Seldin
• Allele 1
  c from C3H/HeJ-Fasl/J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Col9a1	Col3a1	Gls
53	c	c	c
52	s	s	s
1	c	s	s
6	s	c	c
1	c	c	s
1	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Col9a1	Col3a1	7	114	6.140	2.248
Col3a1	Gls	2	114	1.754	1.230