Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  17
• Reference
  J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
• ID
  MGI:42790

Genes

Gene	Assay Type	Description
Pim1	reported elsewhere
H2	reported elsewhere
Tnf	Southern analysis	MuTNF-(alpha)
Notch4	Southern analysis	pA1
Pou5f1	Southern analysis	3' Otf3 probe or 5' Otf3 probe

Notes

• Reference
  Authors use Otf-3a, Otf-3b, Otf-3c, Otf-3d, Otf-3e, Otf-3f, Otf-3g and Otf-3h for locus symbols Pou5f1-rs1, Pou5f1-rs2, Pou5f1-rs3, Pou5f1-rs4, Pou5f1-rs5, Pou5f1-rs6, Pou5f1 and Pou5f1-rs8 respectively.

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Pim1	H2	5	159
H2	Tnf	0	160
Tnf	Notch4	0	156
H2	Notch4	0	159
H2	Pou5f1	2	158
Tnf	Pou5f1	3	186
Notch4	Pou5f1	2	153

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
H2	Notch4	0	159	0.000	0.000
H2	Pou5f1	2	160	1.250	0.878
H2	Tnf	0	160	0.000	0.000
Notch4	Pou5f1	2	155	1.290	0.906
Pim1	H2	5	164	3.049	1.343
Tnf	Notch4	0	156	0.000	0.000
Tnf	Pou5f1	3	189	1.587	0.909