Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  6
• Reference
  J:8525 Bucan M, et al., Genetic and cytogenetic localisation of the homeo box containing genes on mouse chromosome 6 and human chromosome 7. EMBO J. 1986 Nov;5(11):2899-905
• ID
  MGI:42855

Genes

Gene	Assay Type	Description
Hoxa	Southern analysis	Hoxa4 genomic 1
Ggct	reported elsewhere
Cd8a	reported elsewhere

Notes

• Experiment
  BXD lines -3 -17 and -4 typed B and D respectively for Cd8a

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
Hoxa	B	B	B	D	D	B	D	B	D	B	B	B	B	D	D	B	D	B	B	D	D	D	B	D	B	B
Ggct	B	B	B	D	D	B	D	B	D	B	B	B	B	D	B	D	D	B	B	D	D	D	B	D	B	B
Cd8a	D	B	D	D	D	B	D	B	D	B	B	B	B	D	B	D	D	B	D	D	D	B	B	B	B	B

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hoxa	Ggct	2	26	2.174	1.670
Ggct	Cd8a	5	26	6.757	3.817