Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:16931 Ceci JD, et al., Interspecific backcrosses provide an important new tool for centromere mapping of mouse chromosomes. Genomics. 1994 Feb;19(3):515-24
• ID
  MGI:43202

Genes

Gene	Assay Type	Description
Hc6	Southern analysis	pMR196
Met	Southern analysis	pUC5FL
Hoxa10	in situ hybridization	clone 61h

Notes

• Reference
  Authors use Bim-1 Id-2 and Mme for Bim1, Idb2 and Mmel respectively. The crosses described by Table 2 were mislabeled in this reference. The positions of loci determined in this reference were aligned with previously typed markers from a (C57BL/6J x M. spretus)F1 x C57BL/6J backcross and it was observed that loci mapping proximal to markers positioned near the centromere in the previous cross did not extend beyond the centromere.

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b>/<s> <s> <s>
• Strain
  (C57BL/6Ros x M. spretus)F1
• Male Parent
  <s> <s> <s>/<s> <s> <s>
• Strain
  M. spretus
• Allele 1
  b from C57BL/6Ros
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Hc6	Met	3	58
Met	Hoxa10	10	35

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hc6	Met	3	61	4.918	2.769
Met	Hoxa10	10	45	22.222	6.197