Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  2
• Reference
  J:18301 Pilz A, et al., Genetic linkage analysis of the Ak1, Col5a1, Epb7.2, Fpgs, Grp78, Pbx3, and Notch1 genes in the region of mouse chromosome 2 homologous to human chromosome 9q. Genomics. 1994 May 1;21(1):104-9
• ID
  MGI:43407

Genes

Gene	Assay Type	Description
D2Mit1	reported elsewhere
Dbh	Southern analysis	DBH cDNA
Notch1	Southern analysis	Notch1 probe1
Col5a1	Southern analysis	Col5a1 cDNA
Rxra	Southern analysis	Rxra cDNA1
Sptan1	Southern analysis	NESPNA-1
Abl1	Southern analysis	Abl probw
Ak1	Southern analysis	Ak1 cDNA1
Fpgs	Southern analysis	Fpgs probe1
Hspa5	Southern analysis	Grp78 cDNA1
Pbx3	Southern analysis	Pbx3 probe1
Stom	Southern analysis	Epb probe1
Hc	Southern analysis	Hc cDNA
Gsn	Southern analysis	Gsn cDNA
Chrna1	Southern analysis	Acra cDNA

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (AN x M. spretus)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  AN
• Allele 1
  c from C3H/An
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	D2Mit1	Dbh	Notch1	Col5a1	Rxra	Sptan1	Abl1	Ak1	Fpgs	Hspa5	Pbx3	Stom	Hc	Gsn	Chrna1
48	c	c	c	c	c	c	c	c	c	c	c	c	c	c	c
29	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s
12	s	c	c	c	c	c	c	c	c	c	c	c	c	c	c
11	c	s	s	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	c	c	c	c	c	c	c	c	c	c	c	c
1	c	c	c	s	s	s	s	s	s	s	s	s	s	s	s
0	s	s	s	s	s	s	s	s	s	c	c	c	c	c	c
0	c	c	c	c	c	c	c	c	c	s	s	s	s	s	s
1	s	s	s	s	s	s	s	s	s	s	s	c	c	c	c
0	c	c	c	c	c	c	c	c	c	c	c	s	s	s	s
14	s	s	s	s	s	s	s	s	s	s	s	s	s	s	c
9	c	c	c	c	c	c	c	c	c	c	c	c	c	c	s
1	c	c	c	c	c	c	c	c	c	s	s	s	s	s	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D2Mit1	Dbh	23	126	18.254	3.441
Dbh	Notch1	0	126	0.000	0.000
Notch1	Col5a1	1	126	0.794	0.790
Col5a1	Rxra	0	126	0.000	0.000
Rxra	Sptan1	0	126	0.000	0.000
Sptan1	Abl1	0	126	0.000	0.000
Abl1	Ak1	0	126	0.000	0.000
Ak1	Fpgs	0	126	0.000	0.000
Fpgs	Hspa5	1	126	0.794	0.790
Hspa5	Pbx3	0	126	0.000	0.000
Pbx3	Stom	1	126	0.794	0.790
Stom	Hc	0	126	0.000	0.000
Hc	Gsn	0	126	0.000	0.000
Gsn	Chrna1	24	126	19.048	3.498